RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 TJP3O95049 919 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 USP46P62068 366 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 DNAJC3Q13217 504 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 SETDB1Q15047 1291 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 TNFAIP8L3Q5GJ75 292 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 GJB7Q6PEY0 223 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 UNC13DQ70J99 1090 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 KCNK18Q7Z418 384 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 LRRC37BQ96QE4 947 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 NT5C3AQ9H0P0 336 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 GANQ9H2C0 597 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 CTTNBP2NLQ9P2B4 639 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 ABCB11O95342 1321 aa15.24■□□□□ 0.03
COL6A4P2-202ENST00000504443 HNRNPRO43390 633 aaKnown RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 SLC5A1P13866 664 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 VHLP40337 213 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 SKIV2L2P42285 1042 aaKnown RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 KCNJ1P48048 391 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 NLRP10Q86W26 655 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 APLFQ8IW19 511 aaPredicted RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 RBM46Q8TBY0 533 aaKnown RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 NAP1L3Q99457 506 aaPredicted RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 TSG101Q99816 390 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 NUDT12Q9BQG2 462 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 MAGEF1Q9HAY2 307 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 ETNK2Q9NVF9 386 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 WTIPA6NIX2 430 aaPredicted RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 H2AFZP0C0S5 128 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 TAC1P20366 129 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 BPIFB4P59827 614 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 MAPK7Q13164 816 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 TRIM28Q13263 835 aaKnown RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 DBN1Q16643 649 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 H2AFVQ71UI9 128 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 SRRM1Q8IYB3 904 aaKnown RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 RBM17Q96I25 401 aaKnown RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 PNMA5Q96PV4 448 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 RIOK1Q9BRS2 568 aaKnown RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 STMN4Q9H169 189 aaPredicted RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 ATXN10Q9UBB4 475 aa15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 CNOT7Q9UIV1 285 aaKnown RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 AJAP1Q9UKB5 411 aaPredicted RBP15.23■□□□□ 0.03
COL6A4P2-202ENST00000504443 CAPN9O14815 690 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 CYP2D6P10635 497 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 SKIP12755 728 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 NEK3P51956 506 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 MTFR1Q15390 333 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 SPDYCQ5MJ68 293 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 TTC27Q6P3X3 843 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 SLFN11Q7Z7L1 901 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 KBTBD2Q8IY47 623 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 ALG3Q92685 438 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 PTPRN2Q92932 1015 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 DYDC2Q96IM9 177 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 ATP8A2Q9NTI2 1148 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 DOCK2Q92608 1830 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 BTNL10A8MVZ5 291 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 DDX3YO15523 660 aaKnown RBP15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 SETSIPP0DME0 302 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 GALCP54803 685 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 PRUNE1Q86TP1 453 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 DDX12PQ92771 950 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 CARD9Q9H257 536 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 DCLRE1BQ9H816 532 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 STOML1Q9UBI4 398 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 USP20Q9Y2K6 914 aa15.22■□□□□ 0.03
COL6A4P2-202ENST00000504443 IGSF9BQ9UPX0 1349 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 CYTH3O43739 400 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 POLGP54098 1239 aaPredicted RBP15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 FKBP3Q00688 224 aaKnown RBP15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 ZCWPW2Q504Y3 356 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 CMPK2Q5EBM0 449 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 RBM26Q5T8P6 1007 aaKnown RBP15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 GALNT17Q6IS24 598 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 ZDHHC14Q8IZN3 488 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 SLC35G2Q8TBE7 412 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 LARP4BQ92615 738 aaKnown RBP15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 AK8Q96MA6 479 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 PWWP2AQ96N64 755 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 MTRF1LQ9UGC7 380 aaKnown RBP15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 CHORDC1Q9UHD1 332 aaPredicted RBP15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 TRMT112Q9UI30 125 aaKnown RBP15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 POTEMA6NI47 508 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 DDX3XO00571 662 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 PFDN1O60925 122 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 GSTA2P09210 222 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 FAM200BP0CF97 657 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 PTGIRP43119 386 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 PSMC4P43686 418 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 KCNH2Q12809 1159 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 KPNB1Q14974 876 aaKnown RBP15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 GATA6Q92908 595 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 DTNBP1Q96EV8 351 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 CALML4Q96GE6 196 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 MIPEPQ99797 713 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 PHACTR1Q9C0D0 580 aa15.21■□□□□ 0.03
COL6A4P2-202ENST00000504443 CCDC88AQ3V6T2 1871 aa15.21■□□□□ 0.02
COL6A4P2-202ENST00000504443 MAGEA13PA6NCF6 341 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms