RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 KRT85P78386 507 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 NUCB2P80303 420 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 TAP1Q03518 808 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 DRP2Q13474 957 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 CAPSQ13938 189 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 DSC3Q14574 896 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 FAM187BQ17R55 369 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 FAM117BQ6P1L5 589 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 GLB1LQ6UWU2 654 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 SYT2Q8N9I0 419 aaPredicted RBP8.62□□□□□ -1.03
SKP2-203ENST00000504386 FBXO22Q8NEZ5 403 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 CCDC34Q96HJ3 373 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 CDX2Q99626 313 aaPredicted RBP8.62□□□□□ -1.03
SKP2-203ENST00000504386 SH2D3AQ9BRG2 576 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 TMEM117Q9H0C3 514 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 LMAN2LQ9H0V9 348 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 CUEDC2Q9H467 287 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 CDHR5Q9HBB8 845 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 XPNPEP1Q9NQW7 623 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 PCDH10Q9P2E7 1040 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 KANSL3Q9P2N6 904 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 YBX2Q9Y2T7 364 aaKnown RBP8.62□□□□□ -1.03
SKP2-203ENST00000504386 PCDHB12Q9Y5F1 795 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.62□□□□□ -1.03
SKP2-203ENST00000504386 SCN5AQ14524 2016 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 LOXHD1Q8IVV2 1947 aa8.62□□□□□ -1.03
SKP2-203ENST00000504386 LINC01553A4QN01 128 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 N4BP3O15049 544 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 ZBTB39O15060 712 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 TBCAO75347 108 aaKnown RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 PLA2G4BP0C869 781 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 POU3F3P20264 500 aaPredicted RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 GLRA2P23416 452 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 AMPD3Q01432 767 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 UBE3AQ05086 875 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 STRN3Q13033 797 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 PTPAQ15257 358 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 TMEM119Q4V9L6 283 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 TIGD5Q53EQ6 642 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 SPOUT1Q5T280 376 aaKnown RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 RRAGBQ5VZM2 374 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 CDCA2Q69YH5 1023 aaPredicted RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 ECHDC2Q86YB7 292 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 LINC00301Q8NCQ3 95 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 TET1Q8NFU7 2136 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 URGCPQ8TCY9 931 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 ARNTL2Q8WYA1 636 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 LARP4BQ92615 738 aaKnown RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 P2RX5Q93086 422 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 ZNF689Q96CS4 500 aaPredicted RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 FAM161BQ96MY7 647 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 SCAND2PQ9GZW5 306 aaPredicted RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 TTYH1Q9H313 450 aaPredicted RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 TMX1Q9H3N1 280 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 MAGEF1Q9HAY2 307 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 FAM105AQ9NUU6 356 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 FAM13BQ9NYF5 915 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 CLIC4Q9Y696 253 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 MKI67P46013 3256 aaKnown RBP8.61□□□□□ -1.03
SKP2-203ENST00000504386 MICAL3Q7RTP6 2002 aa8.61□□□□□ -1.03
SKP2-203ENST00000504386 WDR81Q562E7 1941 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 TTC3P53804 2025 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 EVPLQ92817 2033 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 CCDC169A6NNP5 214 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 TBKBP1A7MCY6 615 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 PP2D1A8MPX8 630 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 E9PMD0 336 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 C5orf67F2Z3F1 127 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 K7ERI5 159 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 NCK2O43639 380 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 CUTAO60888 179 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 NR1I2O75469 434 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 FAM13AO94988 1023 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 PLS3P13797 630 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 IGFBP4P22692 258 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 MARCKSP29966 332 aaPredicted RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 CTNNB1P35222 781 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 DDIT3P35638 169 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 BMPR1AP36894 532 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 STAT6P42226 847 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 ME1P48163 572 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 CEBPZQ03701 1054 aaKnown RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 KRT17Q04695 432 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 MBTD1Q05BQ5 628 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 PRPF4BQ13523 1007 aaKnown RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 HSP90AA2PQ14568 343 aaPredicted RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 GRIN2CQ14957 1233 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 IL17AQ16552 155 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 KYAT1Q16773 422 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 TCTN1Q2MV58 587 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 DCAF4L1Q3SXM0 396 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 PDE12Q6L8Q7 609 aaKnown RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 RINT1Q6NUQ1 792 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 SLC27A1Q6PCB7 646 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 STXBP4Q6ZWJ1 553 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 C1orf186Q6ZWK4 172 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 Q7L0L9 218 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 SV2BQ7L1I2 683 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms