RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 F5H6K3 240 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 CXCL10P02778 98 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 HOXA5P20719 270 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 KCNA5P22460 613 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 SERPINB4P48594 390 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 CDK8P49336 464 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 DYNLL1P63167 89 aaKnown RBP5.92□□□□□ -1.46
OTUD4-204ENST00000504331 ATP8B2P98198 1209 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 KLRC3Q07444 240 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 SLFN5Q08AF3 891 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 TTLL4Q14679 1199 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 SMAD2Q15796 467 aaKnown RBP5.92□□□□□ -1.46
OTUD4-204ENST00000504331 SLC9C2Q5TAH2 1124 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 PI16Q6UXB8 463 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 ADGRA1Q86SQ6 560 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 GMCL1P1Q8NEA9 526 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 DNERQ8NFT8 737 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 NETO1Q8TDF5 533 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 KCNB2Q92953 911 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 CLP1Q92989 425 aaKnown RBP5.92□□□□□ -1.46
OTUD4-204ENST00000504331 KATNAL1Q9BW62 490 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 NRSN2Q9GZP1 204 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 KATNBL1Q9H079 304 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 SAP130Q9H0E3 1048 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 NSUN3Q9H649 340 aaKnown RBP5.92□□□□□ -1.46
OTUD4-204ENST00000504331 ARPP21Q9UBL0 812 aaPredicted RBP5.92□□□□□ -1.46
OTUD4-204ENST00000504331 EGFL7Q9UHF1 273 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 SALL4Q9UJQ4 1053 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 NOB1Q9ULX3 412 aaKnown RBP5.92□□□□□ -1.46
OTUD4-204ENST00000504331 ZNF318Q5VUA4 2279 aa5.92□□□□□ -1.46
OTUD4-204ENST00000504331 MYH8P13535 1937 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 COL11A1P12107 1806 aaPredicted RBP5.91□□□□□ -1.46
OTUD4-204ENST00000504331 PARP14Q460N5 1801 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 MYADML2A6NDP7 307 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 FAM86C2PA6NEL3 165 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 H3BNC9 293 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 CAND2O75155 1236 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 SURF6O75683 361 aaKnown RBP5.91□□□□□ -1.46
OTUD4-204ENST00000504331 AMHP03971 560 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 RPLP2P05387 115 aaKnown RBP5.91□□□□□ -1.46
OTUD4-204ENST00000504331 MYOGP15173 224 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 CASTP20810 708 aaKnown RBP5.91□□□□□ -1.46
OTUD4-204ENST00000504331 NT5C2P49902 561 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 STAT2P52630 851 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 FGD1P98174 961 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 PURAQ00577 322 aaKnown RBP5.91□□□□□ -1.46
OTUD4-204ENST00000504331 ZP2Q05996 745 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 UBE3CQ15386 1083 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 SBK1Q52WX2 424 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 RNF187Q5TA31 235 aaPredicted RBP5.91□□□□□ -1.46
OTUD4-204ENST00000504331 EGFLAMQ63HQ2 1017 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 PRR23BQ6ZRT6 265 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 DEFB128Q7Z7B8 93 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 ANKMY2Q8IV38 441 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 ZNF444Q8N0Y2 327 aaPredicted RBP5.91□□□□□ -1.46
OTUD4-204ENST00000504331 SPICE1Q8N0Z3 855 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 MIGA1Q8NAN2 632 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 SCFD2Q8WU76 684 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 SCLYQ96I15 445 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 MEIS3Q99687 375 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 TRPV6Q9H1D0 765 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 CHMP4BQ9H444 224 aaKnown RBP5.91□□□□□ -1.46
OTUD4-204ENST00000504331 MKNK2Q9HBH9 465 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 CD320Q9NPF0 282 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 FAM105AQ9NUU6 356 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 VAV3Q9UKW4 847 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 GRIN2DO15399 1336 aa5.91□□□□□ -1.46
OTUD4-204ENST00000504331 SCN10AQ9Y5Y9 1956 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 C5orf67F2Z3F1 127 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 EIF3JO75822 258 aaKnown RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 TTLL1O95922 423 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 SLC3A2P08195 630 aaKnown RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 GNAT2P19087 354 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 SDHBP21912 280 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 MAPK1P28482 360 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 GTF2F1P35269 517 aaKnown RBP eCLIP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 WDR5P61964 334 aaKnown RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 HTRA4P83105 476 aaPredicted RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 PRKCQQ04759 706 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 SIGLEC14Q08ET2 396 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 SMAD4Q13485 552 aaKnown RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 SHROOM1Q2M3G4 852 aaPredicted RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 FAM83BQ5T0W9 1011 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 TAPT1Q6NXT6 567 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 TRMT2AQ8IZ69 625 aaKnown RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 CPXCR1Q8N123 301 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 LRRC47Q8N1G4 583 aaKnown RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 CLASRPQ8N2M8 674 aaKnown RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 FAM200AQ8TCP9 573 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 STAG1Q8WVM7 1258 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 APBB2Q92870 758 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 ASB16Q96NS5 453 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 ANP32EQ9BTT0 268 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 WDR11Q9BZH6 1224 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 CCSER2Q9H7U1 834 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 PIH1D3Q9NQM4 214 aaKnown RBP5.9□□□□□ -1.46
OTUD4-204ENST00000504331 TMEM63CQ9P1W3 806 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 CNTN3Q9P232 1028 aa5.9□□□□□ -1.46
OTUD4-204ENST00000504331 LINC01553A4QN01 128 aa5.89□□□□□ -1.47
OTUD4-204ENST00000504331 NPIPB6E9PJ23 425 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms