RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 BHMT2Q9H2M3 363 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 GHITMQ9H3K2 345 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CIDEBQ9UHD4 219 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 GGA2Q9UJY4 613 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 GINS2Q9Y248 185 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF652Q9Y2D9 606 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 DNAJC16Q9Y2G8 782 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 R3HDM2Q9Y2K5 976 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SH3GLB1Q9Y371 365 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 PALLDQ8WX93 1383 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 PHLPP2Q6ZVD8 1323 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 A0A0D9SFI3 127 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CCDC151A5D8V7 595 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 A6NJY4 79 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 H0Y3Z8 333 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 GPAA1O43292 621 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SPOPO43791 374 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ATG7O95352 703 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 BAG3O95817 575 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CLTAP09496 248 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SKIP12755 728 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ABCB4P21439 1286 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ALDH3A1P30838 453 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 GUCY1A2P33402 732 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 KCNJ6P48051 423 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 IFNAR2P48551 515 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ETF1P62495 437 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 GNGT1P63211 74 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 LMNB2Q03252 620 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CALCOCO2Q13137 446 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ZYXQ15942 572 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 BBS9Q3SYG4 887 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 BTBD8Q5XKL5 378 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 LMBRD2Q68DH5 695 aaPredicted RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF598Q86UK7 904 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 FIBCD1Q8N539 461 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 C12orf50Q8NA57 414 aaPredicted RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 MAIP1Q8WWC4 291 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 KIAA1683Q9H0B3 1180 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 DPH5Q9H2P9 285 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 PANK4Q9NVE7 773 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ETNK2Q9NVF9 386 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CFL2Q9Y281 166 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 USTQ9Y2C2 406 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 LAMB2P55268 1798 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CEMIPQ8WUJ3 1361 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ARHGAP6O43182 974 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 LDHBP07195 334 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ABCB1P08183 1280 aaPredicted RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SFTPCP11686 197 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CD9P21926 228 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ANXA13P27216 316 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 RCVRNP35243 200 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 RFC1P35251 1148 aaPredicted RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 KRT2P35908 639 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 KIF11P52732 1056 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 CUL4AQ13619 759 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF268Q14587 947 aaPredicted RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 IFI16Q16666 785 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ARHGAP44Q17R89 818 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 HERC4Q5GLZ8 1057 aaPredicted RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SH3D19Q5HYK7 790 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 DCLRE1AQ6PJP8 1040 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 XKR5Q6UX68 686 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SLC30A10Q6XR72 485 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 RRAGAQ7L523 313 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 C2CD5Q86YS7 1000 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SYNE4Q8N205 404 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 EXD1Q8NHP7 514 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 AGAP11Q8TF27 550 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 OPTNQ96CV9 577 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 ABHD8Q96I13 439 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 SUCLG2Q96I99 432 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 RSRC1Q96IZ7 334 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 TTPALQ9BTX7 342 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 NSRP1Q9H0G5 558 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 POLD4Q9HCU8 107 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 GJB4Q9NTQ9 266 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 DDX56Q9NY93 547 aaKnown RBP3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 STIM2Q9P246 746 aa3.95□□□□□ -1.78
PCDH11X-208ENST00000504220 MAGEB6P1A0A0J9YX57 407 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 BTBD18B2RXH4 712 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 IRS4O14654 1257 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 HNRNPRO43390 633 aaKnown RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 ZFYP08048 801 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 GM2AP17900 193 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 CNGA1P29973 690 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 CXCR5P32302 372 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 MLH1P40692 756 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 GRIA2P42262 883 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 MLLT3P42568 568 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PRELPP51888 382 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 POLR2GP62487 172 aaKnown RBP eCLIP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 TNNC1P63316 161 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 SKOR1P84550 965 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PRKG1Q13976 671 aa3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 PDE1CQ14123 709 aaPredicted RBP3.94□□□□□ -1.78
PCDH11X-208ENST00000504220 DSC3Q14574 896 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms