RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 LRRIQ4A6NIV6 560 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 INO80B-WBP1J3KQ70 363 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 HIP1RO75146 1068 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 SLC34A2O95436 690 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 SSBP05455 408 aaKnown RBP eCLIP20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 AXLP30530 894 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 HOXA11P31270 313 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 TXLNAP40222 546 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 ERVK-21P61565 698 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 DNM1Q05193 864 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 AMHR2Q16671 573 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 ECHDC2Q86YB7 292 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 ZBTB8OSQ8IWT0 167 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 CMTR2Q8IYT2 770 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 DAW1Q8N136 415 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 RAD54LQ92698 747 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 IFT74Q96LB3 600 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 DRC1Q96MC2 740 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 C2orf40Q9H1Z8 148 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 CCDC39Q9UFE4 941 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 ADGRA3Q8IWK6 1321 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 LOXHD1Q8IVV2 1947 aa20.17■□□□□ 0.82
PDLIM7-209ENST00000503346 GBF1Q92538 1859 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 TSPAN1O60635 241 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 ERLIN2O94905 339 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 SKIP12755 728 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 MAPK7Q13164 816 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 TWF2Q6IBS0 349 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 PPP4R3CPQ6ZMV5 832 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 SPRED2Q7Z698 418 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 ZNF598Q86UK7 904 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 DEPTORQ8TB45 409 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 TGS1Q96RS0 853 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 FZD8Q9H461 694 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 C17orf75Q9HAS0 396 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 POLD4Q9HCU8 107 aa20.16■□□□□ 0.82
PDLIM7-209ENST00000503346 CUTAO60888 179 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 EOMESO95936 686 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 DDIT3P35638 169 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 NCBP1Q09161 790 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 BTG3Q14201 252 aaPredicted RBP20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 FAM187BQ17R55 369 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 ARSHQ5FYA8 562 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 FIBCD1Q8N539 461 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 LARP4BQ92615 738 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 CCDC51Q96ER9 411 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 PRIMPOLQ96LW4 560 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 PRDM12Q9H4Q4 367 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 PRMT7Q9NVM4 692 aaPredicted RBP20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 STK17AQ9UEE5 414 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 RCOR1Q9UKL0 485 aa20.15■□□□□ 0.82
PDLIM7-209ENST00000503346 HOXA2O43364 376 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 ZNF623O75123 536 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 LINC00271P0C7V0 271 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 ATF7P17544 494 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 IBSPP21815 317 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 RAB27AP51159 221 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 MCM6Q14566 821 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 UBXN11Q5T124 520 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 AXDND1Q5T1B0 1012 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 RRAGBQ5VZM2 374 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 NOTUMQ6P988 496 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 CCDC73Q6ZRK6 1079 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 MYLIPQ8WY64 445 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 ARNTL2Q8WYA1 636 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 SAMD11Q96NU1 681 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 CCDC113Q9H0I3 377 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 CERS4Q9HA82 394 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 FAM105AQ9NUU6 356 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 RNF19AQ9NV58 838 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 STXBP5LQ9Y2K9 1186 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 ATP6V1DQ9Y5K8 247 aa20.14■□□□□ 0.81
PDLIM7-209ENST00000503346 EPOPA6NHQ4 379 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 FGFR1P11362 822 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 ARF4P18085 180 aaPredicted RBP20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 NPTX2P47972 431 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 GATMP50440 423 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 EFNA5P52803 228 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 PEX3P56589 373 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 DMP1Q13316 513 aaPredicted RBP20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 MAPK6Q16659 721 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 NAALADL2Q58DX5 795 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 GPBP1Q86WP2 473 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 CLP1Q92989 425 aaKnown RBP20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 C17orf80Q9BSJ5 609 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 KIFC3Q9BVG8 833 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 KCNG1Q9UIX4 513 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 ODF2LQ9ULJ1 636 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 CHD7Q9P2D1 2997 aa20.13■□□□□ 0.81
PDLIM7-209ENST00000503346 MYH15Q9Y2K3 1946 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 B4GALT5O43286 388 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 PLS3P13797 630 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 KRT85P78386 507 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 NUCB2P80303 420 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 RAD51AP2Q09MP3 1159 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 SHC4Q6S5L8 630 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 MRPL10Q7Z7H8 261 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 SPIRE2Q8WWL2 714 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 CPB2Q96IY4 423 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 NTPCRQ9BSD7 190 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms