RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
CLCN3-203ENST00000502998 SCN11AQ9UI33 1791 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 PXDNLA1KZ92 1463 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 AK9Q5TCS8 1911 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 SYNJ2BP-COX16A0A087WUM0 186 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 CARNS1A5YM72 827 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 OR5K4A6NMS3 321 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 SPDYE16A6NNV3 312 aaPredicted RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 NOTOA8MTQ0 251 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 FAM47E-STBD1D6RA91 191 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 IGF2BP3O00425 579 aaKnown RBP eCLIP7□□□□□ -1.29
CLCN3-203ENST00000502998 RNGTTO60942 597 aaKnown RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 PTCD1O75127 700 aaKnown RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 RPS6KA4O75676 772 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 DDHD2O94830 711 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 PRPF6O94906 941 aaKnown RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 BPNT1O95861 308 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 KRT6AP02538 564 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 KRT6BP04259 564 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 ITGB1P05556 798 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 HMOX1P09601 288 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 RHOXF2BP0C7M4 288 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 GLULP15104 373 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 VAMP1P23763 118 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 GSDMDP57764 484 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 DNAJC3Q13217 504 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 ADAM9Q13443 819 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 LSAMPQ13449 338 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 MOGQ16653 247 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 ACCSLQ4AC99 568 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 ALFQ53S48 1182 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 AKAP4Q5JQC9 854 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 ODR4Q5SWX8 454 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 CYP4A22Q5TCH4 519 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 SYDE2Q5VT97 1194 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 PLBD1Q6P4A8 553 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 C16orf54Q6UWD8 224 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 CAPN12Q6ZSI9 719 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 ATG9AQ7Z3C6 839 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 PPP1R42Q7Z4L9 355 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 NLRP10Q86W26 655 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 RASSF3Q86WH2 238 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 PLA2G4DQ86XP0 818 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 NPAS4Q8IUM7 802 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 HACE1Q8IYU2 909 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 DZIP1LQ8IYY4 767 aaKnown RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 FAM9CQ8IZT9 166 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 TNS4Q8IZW8 715 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 TMEM57Q8N5G2 664 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 SHCBP1Q8NEM2 672 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 PPHLN1Q8NEY8 458 aaKnown RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 OR7G1Q8NGA0 311 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 HERVK_113Q902F9 699 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 AZIN2Q96A70 460 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 LENG1Q96BZ8 264 aaPredicted RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 RBM18Q96H35 190 aaKnown RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 HIC2Q96JB3 615 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 HAPLN3Q96S86 360 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 MPHOSPH8Q99549 860 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 CIB1Q99828 191 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 RHOXF2Q9BQY4 288 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 FAIMQ9NVQ4 179 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 EHD2Q9NZN4 543 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 LAMP5Q9UJQ1 280 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 VANGL2Q9ULK5 521 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 STRIP2Q9ULQ0 834 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 L1RE1Q9UN81 338 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 TMEM5Q9Y2B1 443 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 L3MBTL1Q9Y468 752 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 MAFBQ9Y5Q3 323 aaPredicted RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 C4AP0C0L4 1744 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 TJP1Q07157 1748 aa7□□□□□ -1.29
CLCN3-203ENST00000502998 N4BP2Q86UW6 1770 aaPredicted RBP7□□□□□ -1.29
CLCN3-203ENST00000502998 KIF13BQ9NQT8 1826 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 MYH14Q7Z406 1995 aaKnown RBP6.99□□□□□ -1.29
CLCN3-203ENST00000502998 TRAV6A0A075B6T7 132 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 A0A0J9YVX5 310 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 CFAP73A6NFT4 308 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 SNTNA6NMZ2 147 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 SYCE1LA8MT33 242 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 FADS2P1A8MWK0 482 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 E7ENQ6 273 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 GOLGA8MH3BSY2 632 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 TK2O00142 265 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 TRDMT1O14717 391 aaKnown RBP6.99□□□□□ -1.29
CLCN3-203ENST00000502998 DGKIO75912 1065 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 CALM1P0DP23 149 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 CALM2P0DP24 149 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 CALM3P0DP25 149 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 HCLS1P14317 486 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-203ENST00000502998 HSD3B2P26439 372 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 LSP1P33241 339 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 RFC4P35249 363 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 ECE1P42892 770 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 CRKLP46109 303 aaKnown RBP6.99□□□□□ -1.29
CLCN3-203ENST00000502998 TMED10P49755 219 aaKnown RBP6.99□□□□□ -1.29
CLCN3-203ENST00000502998 ZNF75DP51815 510 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 SSTP61278 116 aa6.99□□□□□ -1.29
CLCN3-203ENST00000502998 ETF1P62495 437 aaKnown RBP6.99□□□□□ -1.29
CLCN3-203ENST00000502998 DNM1Q05193 864 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms