RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 AGPAT5Q9NUQ2 364 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 FAM105AQ9NUU6 356 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 TBC1D13Q9NVG8 400 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 DPP7Q9UHL4 492 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 SSX2IPQ9Y2D8 614 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 PCDHGC5Q9Y5F6 944 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 C2orf16Q68DN1 1984 aa6.86□□□□□ -1.31
LSM3P4-201ENST00000502948 STK36Q9NRP7 1315 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 LILRB3O75022 631 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 OFD1O75665 1012 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 P4HBP07237 508 aaKnown RBP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 GALTP07902 379 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 AXLP30530 894 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 RFC5P40937 340 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 NBL1P41271 181 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 QARSP47897 775 aaKnown RBP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 CLCN5P51795 746 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 NLRP5P59047 1200 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 RBM10P98175 930 aaKnown RBP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 FOXK2Q01167 660 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 SSRP1Q08945 709 aaKnown RBP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 TOB2Q14106 344 aaPredicted RBP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 NONOQ15233 471 aaKnown RBP eCLIP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 NPY5RQ15761 445 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 UGCGQ16739 394 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 NOMO2Q5JPE7 1267 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 IER5LQ5T953 404 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 PLPP4Q5VZY2 271 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 CPLX2Q6PUV4 134 aaKnown RBP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 ANO5Q75V66 913 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 KRT25Q7Z3Z0 450 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 IFNLR1Q8IU57 520 aaPredicted RBP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 RNF168Q8IYW5 571 aaPredicted RBP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 BLIDQ8IZY5 108 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 VPS52Q8N1B4 723 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 HELQQ8TDG4 1101 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 SLC22A17Q8WUG5 538 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 TCP11Q8WWU5 503 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 NLRP7Q8WX94 980 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 SLC7A3Q8WY07 619 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 CCDC51Q96ER9 411 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 SLC26A6Q9BXS9 759 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 NFKBIZQ9BYH8 718 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 POMKQ9H5K3 350 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 NRDE2Q9H7Z3 1164 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 SFXN1Q9H9B4 322 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 CYP26B1Q9NR63 512 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 VPS54Q9P1Q0 977 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 HCSTQ9UBK5 93 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 SEPT9Q9UHD8 586 aaPredicted RBP6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 USP34Q70CQ2 3546 aa6.85□□□□□ -1.31
LSM3P4-201ENST00000502948 ZDBF2Q9HCK1 2354 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 A0A087WZ62 844 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 C2CD4DB7Z1M9 353 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 GALR2O43603 387 aaPredicted RBP6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 CDKL5O76039 1030 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 LYPLA2O95372 231 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 CXCL14O95715 111 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 ALDH2P05091 517 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 NCLP19338 710 aaKnown RBP6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 HOXA11P31270 313 aaPredicted RBP6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 DRP2Q13474 957 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 MXD4Q14582 209 aaPredicted RBP6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 EPHA7Q15375 998 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 PTPN14Q15678 1187 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 MTERF2Q49AM1 385 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 TWF2Q6IBS0 349 aaKnown RBP6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 ELMSAN1Q6PJG2 1045 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 OTUD6AQ7L8S5 288 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 OTOP3Q7RTS5 596 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 GPR149Q86SP6 731 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 KREMEN2Q8NCW0 462 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 NXPE3Q969Y0 559 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 ACSF2Q96CM8 615 aaPredicted RBP6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 BORCS6Q96GS4 357 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 SCLT1Q96NL6 688 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 FDXACB1Q9BRP7 624 aaPredicted RBP6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 PHF20Q9BVI0 1012 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 EMILIN2Q9BXX0 1053 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 RXFP1Q9HBX9 757 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 IGSF9Q9P2J2 1179 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 SUCLA2Q9P2R7 463 aaPredicted RBP6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 DDX25Q9UHL0 483 aaKnown RBP6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 VAV3Q9UKW4 847 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 PCDHB2Q9Y5E7 798 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 COL4A3BPQ9Y5P4 624 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 CYP46A1Q9Y6A2 500 aa6.84□□□□□ -1.31
LSM3P4-201ENST00000502948 FANCMQ8IYD8 2048 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 CPLX1O14810 134 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 CHMP2AO43633 222 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 ZC3H11AO75152 810 aaKnown RBP eCLIP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 TDP2O95551 362 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 BRD1O95696 1058 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 SOD2P04179 222 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 XRCC6P12956 609 aaKnown RBP eCLIP6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 CPA1P15085 419 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 XBP1P17861 261 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 CLCN4P51793 760 aa6.83□□□□□ -1.32
LSM3P4-201ENST00000502948 VCPP55072 806 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms