RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 LRFN3Q9BTN0 628 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 DLL4Q9NR61 685 aa6.63□□□□□ -1.35
HMGB1P3-201ENST00000502802 GOLIM4O00461 696 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 MAFO75444 373 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 IL12RB1P42701 662 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 ALDH5A1P51649 535 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 AGFG1P52594 562 aaKnown RBP6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 CACNB3P54284 484 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 NRG3P56975 720 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 YBX1P67809 324 aaKnown RBP6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 STILQ15468 1287 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 GRAMD1BQ3KR37 738 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 RNF220Q5VTB9 566 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 MIGA2Q7L4E1 593 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 GLB1L2Q8IW92 636 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 FAM26EQ8N5C1 309 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 DTX3Q8N9I9 347 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 GLB1L3Q8NCI6 653 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 FLAD1Q8NFF5 587 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 RIN2Q8WYP3 895 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 BHMT2Q9H2M3 363 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 PLCB1Q9NQ66 1216 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 DMRT3Q9NQL9 472 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 KMT5AQ9NQR1 393 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 ARHGAP20Q9P2F6 1191 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 SYNPO2Q9UMS6 1093 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 PCDHGB6Q9Y5F9 930 aa6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 CFAP20Q9Y6A4 193 aaKnown RBP6.62□□□□□ -1.35
HMGB1P3-201ENST00000502802 CAPN8A6NHC0 703 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 SEC24DO94855 1032 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 IL13RA1P78552 427 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 PPP3CAQ08209 521 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 IL10RAQ13651 578 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 CNN3Q15417 329 aaKnown RBP6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 DGKDQ16760 1214 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 LONRF1Q17RB8 773 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 KANK2Q63ZY3 851 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 OLFML2BQ68BL8 750 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 PPP4R3AQ6IN85 833 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 FAM180AQ6UWF9 173 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 DPP8Q6V1X1 898 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 DAAM2Q86T65 1068 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 CPA5Q8WXQ8 436 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 DPF2Q92785 391 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 KIRREL1Q96J84 757 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 PTPRHQ9HD43 1115 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 RBM12Q9NTZ6 932 aaKnown RBP6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 STXBP5LQ9Y2K9 1186 aa6.61□□□□□ -1.35
HMGB1P3-201ENST00000502802 IL18BPO95998 194 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 RPLP2P05387 115 aaKnown RBP6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 NCAM1P13591 858 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 GLRBP48167 497 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 ZNF200P98182 395 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 DSC2Q02487 901 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 CACNB2Q08289 660 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 MGAT2Q10469 447 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 MAP3K12Q12852 859 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 FAM83BQ5T0W9 1011 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 THEMIS2Q5TEJ8 643 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 LMBR1LQ6UX01 489 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 CXXC5Q7LFL8 322 aaKnown RBP6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 TMC6Q7Z403 805 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 TTC7BQ86TV6 843 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 ACRBPQ8NEB7 543 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 OR5AN1Q8NGI8 311 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 KLHDC4Q8TBB5 520 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 KAT5Q92993 513 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 TMEM209Q96SK2 561 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 FDXACB1Q9BRP7 624 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 TACO1Q9BSH4 297 aaKnown RBP6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 HAPLN2Q9GZV7 340 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 PLA2G2DQ9UNK4 145 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 DMTF1Q9Y222 760 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 POLHQ9Y253 713 aa6.6□□□□□ -1.35
HMGB1P3-201ENST00000502802 A0A0A6YYK5 440 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 FAM171A2A8MVW0 826 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 SLC16A6O15403 523 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 ADAMTS4O75173 837 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 FTLP02792 175 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 C8BP07358 591 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 ZKSCAN1P17029 563 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 PEX2P28328 305 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 TM4SF4P48230 202 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 MAP2K6P52564 334 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 CD83Q01151 205 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 MGAT5Q09328 741 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 IFIT5Q13325 482 aaKnown RBP6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 NOMO1Q15155 1222 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 FYB2Q5VWT5 728 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 MAEAQ7L5Y9 396 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 IRF2BP1Q8IU81 584 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 IFNL2Q8IZJ0 200 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 OR2I1PQ8NGU4 316 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 PPP1R14CQ8TAE6 165 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 RGMAQ96B86 450 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 PGBD4Q96DM1 585 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 C7orf25Q9BPX7 421 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 SOX7Q9BT81 388 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 NUP62CLQ9H1M0 184 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms