RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 ATP6V1C1P21283 382 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 AP1S1P61966 158 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 XKR9Q5GH70 373 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 SETD3Q86TU7 594 aaPredicted RBP11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 TRIM51Q9BSJ1 452 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 TMEM206Q9H813 350 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 NMRK1Q9NWW6 199 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 HAUS5O94927 633 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 MOCS3O95396 460 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 KPNB1Q14974 876 aaKnown RBP11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 PMF1Q6P1K2 205 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 TCEANC2Q96MN5 208 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 PARVAQ9NVD7 372 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 ZNF518AQ6AHZ1 1483 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 NSMFQ6X4W1 530 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 LRRC8AQ8IWT6 810 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 XAGE3Q8WTP9 111 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 SPATA16Q9BXB7 569 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 M0R2C6 588 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 CYTH3O43739 400 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 PSMC2P35998 433 aaKnown RBP11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 POLR2FP61218 127 aaKnown RBP11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 LONRF3Q496Y0 759 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 C18orf25Q96B23 403 aaPredicted RBP11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 WWP1Q9H0M0 922 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 SLC24A3Q9HC58 644 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 PPIP5K1Q6PFW1 1433 aa11.86□□□□□ -0.51
AC055713.1-201ENST00000498967 MYO1CO00159 1063 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 NSUN2Q08J23 767 aaKnown RBP eCLIP11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 ITPRIPL1Q6GPH6 555 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 PADI6Q6TGC4 694 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 NELFCDQ8IXH7 590 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 WDR48Q8TAF3 677 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 AK8Q96MA6 479 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 KCNK16Q96T55 309 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 V9GY48 417 aaPredicted RBP11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 A2MP01023 1474 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 RAPGEF6Q8TEU7 1601 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 CBFBQ13951 182 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 C16orf89Q6UX73 402 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 UGGT2Q9NYU1 1516 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 PDZK1P1A8MUH7 402 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 TTC39CQ8N584 583 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 ZBTB1Q9Y2K1 713 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 ARHGEF12Q9NZN5 1544 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 PCP11498 1178 aaKnown RBP11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 CCNA1P78396 465 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 TERF2Q15554 542 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 APOA5Q6Q788 366 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 KLHL8Q9P2G9 620 aaPredicted RBP11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 EVPLLA8MZ36 301 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 ITGA1P56199 1179 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 MNTQ99583 582 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 ZBED2Q9BTP6 218 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 SLITRK6Q9H5Y7 841 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 ADD3Q9UEY8 706 aaKnown RBP11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 VAV3Q9UKW4 847 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 WDR91A4D1P6 747 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 CHP2O43745 196 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 SPATA1Q5VX52 437 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 CPXCR1Q8N123 301 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 SEPT1Q8WYJ6 367 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 FAM161BQ96MY7 647 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 ENOPH1Q9UHY7 261 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 ZNF215Q9UL58 517 aaPredicted RBP11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 PIPSLA2A3N6 862 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 WARSP23381 471 aaKnown RBP11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 LRRC74AQ0VAA2 488 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 DDX50Q9BQ39 737 aaKnown RBP11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 NEK6Q9HC98 313 aa11.85□□□□□ -0.51
AC055713.1-201ENST00000498967 ADAMTS2O95450 1211 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 FOSP01100 380 aaPredicted RBP11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 SERPINB3P29508 390 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 STAT5AP42229 794 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 STAT5BP51692 787 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 NLRP11P59045 1033 aaKnown RBP11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 FAM9CQ8IZT9 166 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 ARL8AQ96BM9 186 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 HMG20AQ9NP66 347 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 CTIFO43310 598 aaKnown RBP11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 STX11O75558 287 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 MLNP12872 115 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 FKBP3Q00688 224 aaKnown RBP11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 NDUFAF6Q330K2 333 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 EXT2Q93063 718 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 SERHL2Q9H4I8 314 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 TRIM39Q9HCM9 518 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 SERHLQ9NQF3 203 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 KCNA2P16389 499 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 ATP12AP54707 1039 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 RAD23BP54727 409 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 BTN3A2P78410 334 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 EFL1Q7Z2Z2 1120 aaKnown RBP11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 UHMK1Q8TAS1 419 aaKnown RBP11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 ASIC4Q96FT7 647 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 CHAMP1Q96JM3 812 aa11.84□□□□□ -0.51
AC055713.1-201ENST00000498967 PCDHB15Q9Y5E8 787 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms