RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CERS5Q8N5B7 392 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 NSUN7Q8NE18 718 aaKnown RBP6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 CXorf38Q8TB03 319 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 DIS3LQ8TF46 1054 aaKnown RBP6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 WASF1Q92558 559 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 DDX11Q96FC9 970 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 COX4I2Q96KJ9 171 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 ZDHHC15Q96MV8 337 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 ZSCAN16Q9H4T2 348 aaPredicted RBP6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 MYOZ2Q9NPC6 264 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 TCP11L1Q9NUJ3 509 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 MTMR6Q9Y217 621 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 BAZ2AQ9UIF9 1905 aaKnown RBP6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 ZSWIM8A7E2V4 1837 aa6.11□□□□□ -1.43
HMGXB4-208ENST00000498325 COL2A1P02458 1487 aaPredicted RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 ROBO3Q96MS0 1386 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 FLT1P17948 1338 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 RFXAPO00287 272 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 TRIM13O60858 407 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 PAGE1O75459 146 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 PRDM1O75626 825 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 SGPL1O95470 568 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 HLA-DOAP06340 250 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 TSPY3P0CV98 308 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 TSPY8P0CW00 308 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 CYP2D6P10635 497 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 CAP2P40123 477 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 AKAP17AQ02040 695 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 SSRP1Q08945 709 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 PICALMQ13492 652 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 TRIM29Q14134 588 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 ARHGEF6Q15052 776 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 SEC23AQ15436 765 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 NKG7Q16617 165 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 SCARA3Q6AZY7 606 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 APOBEC3HQ6NTF7 200 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 CDC42EP5Q6NZY7 148 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 C16orf86Q6ZW13 317 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 GGNQ86UU5 652 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 MICU3Q86XE3 530 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 DGKHQ86XP1 1220 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 TMEM151BQ8IW70 566 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 ZNF654Q8IZM8 581 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 AGBL3Q8NEM8 1001 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 PAWRQ96IZ0 340 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 DMRTB1Q96MA1 342 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 LRFN3Q9BTN0 628 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 MXD3Q9BW11 206 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 CEP44Q9C0F1 390 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 DHX36Q9H2U1 1008 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 NCOA5Q9HCD5 579 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 RBM28Q9NW13 759 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 TMOD2Q9NZR1 351 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 ORC3Q9UBD5 711 aaPredicted RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 SWAP70Q9UH65 585 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 SAP30BPQ9UHR5 308 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 KCTD3Q9Y597 815 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 TACC3Q9Y6A5 838 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 NAV1Q8NEY1 1877 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 LAMB1P07942 1786 aa6.1□□□□□ -1.43
HMGXB4-208ENST00000498325 NID2Q14112 1375 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 ZNF646O15015 1829 aaPredicted RBP6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 STK36Q9NRP7 1315 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 TEX51A0A1B0GUA7 166 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 ENC1O14682 589 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 JAK2O60674 1132 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 ENTPD3O75355 529 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 PRPF40AO75400 957 aaKnown RBP6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 WDHD1O75717 1129 aaPredicted RBP6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 DDAH1O94760 285 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 CTDNEP1O95476 244 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 IFNAR1P17181 557 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 XBP1P17861 261 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 GRK4P32298 578 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 NF2P35240 595 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 CDK8P49336 464 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 GNAQP50148 359 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 PLCD1P51178 756 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 KRTAP10-2P60368 255 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 ETF1P62495 437 aaKnown RBP6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 LACTBP83111 547 aaPredicted RBP6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 INPP5AQ14642 412 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 DLGAP5Q15398 846 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 CFAP100Q494V2 611 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 FAM47AQ5JRC9 791 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 ATL3Q6DD88 541 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 OTUD7BQ6GQQ9 843 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 LRFN4Q6PJG9 635 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 FOXP4Q8IVH2 680 aaPredicted RBP6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 LILRA2Q8N149 483 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 ENAHQ8N8S7 591 aaPredicted RBP6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 FANCBQ8NB91 859 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 PDZD8Q8NEN9 1154 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 CTCFLQ8NI51 663 aaPredicted RBP6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 NUP133Q8WUM0 1156 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 ANKS1AQ92625 1134 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 ALKBH8Q96BT7 664 aaKnown RBP6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 DYNLL2Q96FJ2 89 aa6.09□□□□□ -1.43
HMGXB4-208ENST00000498325 C8orf76Q96K31 380 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms