RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MYH11P35749 1972 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 GRXCR2A6NFK2 248 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 SRGAP2CP0DJJ0 459 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 GTF2F1P35269 517 aaKnown RBP eCLIP9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 LTBRP36941 435 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 RAB27AP51159 221 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 LAMTOR4Q0VGL1 99 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 ORC2Q13416 577 aaPredicted RBP9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 RABEP1Q15276 862 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 KCNT2Q6UVM3 1135 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 ADGRD2Q7Z7M1 963 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 FERMT3Q86UX7 667 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 RNF149Q8NC42 400 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 FBXO18Q8NFZ0 1043 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 HELQQ8TDG4 1101 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 MICAL1Q8TDZ2 1067 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 PRPF31Q8WWY3 499 aaKnown RBP9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 RSPH1Q8WYR4 309 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 SLC39A7Q92504 469 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 ZNF558Q96NG5 402 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 MRPL9Q9BYD2 267 aaKnown RBP9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 ANKEF1Q9NU02 776 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 AGPAT5Q9NUQ2 364 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 FAM105AQ9NUU6 356 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 FAM50BQ9Y247 325 aa9.45□□□□□ -0.9
HMGXB4-207ENST00000498212 LINC01565O15544 149 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 ST18O60284 1047 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 TBX10O75333 385 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 DGAT1O75907 488 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 OR52Z1P0C646 297 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 PPM1AP35813 382 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 PBX3P40426 434 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 TECP42680 631 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 NRIP1P48552 1158 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 RARRES1P49788 294 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 NDUFV1P49821 464 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 PLCB3Q01970 1234 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 DLX2Q07687 328 aaPredicted RBP9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 ADAM15Q13444 863 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 MXD4Q14582 209 aaPredicted RBP9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 ZNF174Q15697 407 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 TTC38Q5R3I4 469 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 PDE12Q6L8Q7 609 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 RBM23Q86U06 439 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 NOSTRINQ8IVI9 506 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 FAM178BQ8IXR5 827 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 MRPS27Q92552 414 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 LPPQ93052 612 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 MINDY3Q9H8M7 445 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 UPF2Q9HAU5 1272 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 TUFT1Q9NNX1 390 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 XPNPEP1Q9NQW7 623 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 PUF60Q9UHX1 559 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 NOL7Q9UMY1 257 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 LZTS1Q9Y250 596 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 PCDHGC5Q9Y5F6 944 aa9.44□□□□□ -0.9
HMGXB4-207ENST00000498212 CUL9Q8IWT3 2517 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 FSCN2O14926 492 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 MBTPS2O43462 519 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 ZNF623O75123 536 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 ERLIN2O94905 339 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 SPATA31C1P0DKV0 1188 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 XRCC6P12956 609 aaKnown RBP eCLIP9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 AXLP30530 894 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 TRAPPC10P48553 1259 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 ALDH7A1P49419 539 aaKnown RBP9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 ERVFC1P60507 584 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 KRT17Q04695 432 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 POU5F1BQ06416 359 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 TFDP1Q14186 410 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 PCBP1Q15365 356 aaKnown RBP eCLIP9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 CLUL1Q15846 466 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 LONRF3Q496Y0 759 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 PLPP4Q5VZY2 271 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 GLB1LQ6UWU2 654 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 CATSPER3Q86XQ3 398 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 EFHBQ8N7U6 833 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 ERMNQ8TAM6 284 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 PIGOQ8TEQ8 1089 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 PGBD4Q96DM1 585 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 CDCA3Q99618 268 aaPredicted RBP9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 TLE6Q9H808 572 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 SPG21Q9NZD8 308 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 CD207Q9UJ71 328 aa9.43□□□□□ -0.9
HMGXB4-207ENST00000498212 A0A087WWV3 80 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 FSD2A1L4K1 749 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 CARNS1A5YM72 827 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 MEIS3P2A8K0S8 358 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 NT5C1B-RDH14C9J2C7 533 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 INO80B-WBP1J3KQ70 363 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 PER2O15055 1255 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 USO1O60763 962 aaKnown RBP9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 ZC3H11AO75152 810 aaKnown RBP eCLIP9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 MED24O75448 989 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 OFD1O75665 1012 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 GLP2RO95838 553 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 C7P10643 843 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 U2AF2P26368 475 aaKnown RBP eCLIP9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 RPA1P27694 616 aa9.42□□□□□ -0.9
HMGXB4-207ENST00000498212 HOXA11P31270 313 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms