RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 WASHC2AQ641Q2 1341 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 SOGA1O94964 1423 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 RAD17O75943 681 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 VSIG10L2P0DP72 767 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 IBSPP21815 317 aaPredicted RBP6.51□□□□□ -1.37
SSR3-209ENST00000498205 ENPP1P22413 925 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 MAGEA10P43363 369 aaPredicted RBP6.51□□□□□ -1.37
SSR3-209ENST00000498205 KIR2DL3P43628 341 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 MRPS9P82933 396 aaKnown RBP6.51□□□□□ -1.37
SSR3-209ENST00000498205 LIMS2Q7Z4I7 341 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 POLNQ7Z5Q5 900 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 SHCBP1Q8NEM2 672 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 OR14K1Q8NGZ2 314 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 CFHR4Q92496 578 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 AHCYL2Q96HN2 611 aaKnown RBP6.51□□□□□ -1.37
SSR3-209ENST00000498205 MPHOSPH9Q99550 1183 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 MENTQ9BUN1 341 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 ANO3Q9BYT9 981 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 TOPORSQ9NS56 1045 aaPredicted RBP6.51□□□□□ -1.37
SSR3-209ENST00000498205 USP18Q9UMW8 372 aa6.51□□□□□ -1.37
SSR3-209ENST00000498205 ZFR2Q9UPR6 939 aaKnown RBP6.51□□□□□ -1.37
SSR3-209ENST00000498205 NCANO14594 1321 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 SYNJ1O43426 1573 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 C2orf78A6NCI8 922 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 GOLGA8BA8MQT2 603 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 ALG1L2C9J202 215 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 BPIFB4P59827 614 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 KRT40Q6A162 431 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 CCDC62Q6P9F0 684 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 ADGRE4PQ86SQ3 457 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 ORAI2Q96SN7 254 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 C1QTNF3Q9BXJ4 246 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 DEF6Q9H4E7 631 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 MAGEL2Q9UJ55 1249 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 TMPRSS11EQ9UL52 423 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 RBM8AQ9Y5S9 174 aaKnown RBP6.5□□□□□ -1.37
SSR3-209ENST00000498205 CLSPNQ9HAW4 1339 aa6.5□□□□□ -1.37
SSR3-209ENST00000498205 A0A0A6YYK5 440 aaPredicted RBP6.49□□□□□ -1.37
SSR3-209ENST00000498205 GOLGA8AA7E2F4 631 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 MATN2O00339 956 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 ZNF623O75123 536 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 GAAP10253 952 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 POU3F3P20264 500 aaPredicted RBP6.49□□□□□ -1.37
SSR3-209ENST00000498205 COMTP21964 271 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 SELENOPP49908 381 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 WNT3AP56704 352 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 PPARAQ07869 468 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSR3-209ENST00000498205 ANO4Q32M45 955 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 TCTN3Q6NUS6 607 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 FAM180AQ6UWF9 173 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 PRRT2Q7Z6L0 340 aaPredicted RBP6.49□□□□□ -1.37
SSR3-209ENST00000498205 DDX42Q86XP3 938 aaKnown RBP eCLIP6.49□□□□□ -1.37
SSR3-209ENST00000498205 LMBR1Q8WVP7 490 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 SSH1Q8WYL5 1049 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 DVL3Q92997 716 aaPredicted RBP6.49□□□□□ -1.37
SSR3-209ENST00000498205 FAM89AQ96GI7 184 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 PTPN18Q99952 460 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 DPYSL5Q9BPU6 564 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 SOX7Q9BT81 388 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 PLA2G12BQ9BX93 195 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 SLC5A4Q9NY91 659 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 CDY2AQ9Y6F7 541 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 VPS8Q8N3P4 1428 aa6.49□□□□□ -1.37
SSR3-209ENST00000498205 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 A0A1W2PRX2 142 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 TOX4O94842 621 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 NCLP19338 710 aaKnown RBP6.48□□□□□ -1.37
SSR3-209ENST00000498205 ATP2C1P98194 919 aaPredicted RBP6.48□□□□□ -1.37
SSR3-209ENST00000498205 HHEXQ03014 270 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 RIN1Q13671 783 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 PDCD1Q15116 288 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 PITRM1Q5JRX3 1037 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 SLC41A1Q8IVJ1 513 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 FAM9AQ8IZU1 332 aaPredicted RBP6.48□□□□□ -1.37
SSR3-209ENST00000498205 ANKRD53Q8N9V6 530 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 AUTS2Q8WXX7 1259 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 EDAQ92838 391 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 GNRHR2Q96P88 292 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 MS4A5Q9H3V2 200 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.48□□□□□ -1.37
SSR3-209ENST00000498205 RCAN3Q9UKA8 241 aa6.48□□□□□ -1.37
SSR3-209ENST00000498205 PRXQ9BXM0 1461 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 LCHNA4D1U4 455 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 CYP27B1O15528 508 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 PRKD3O94806 890 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 ADRB1P08588 477 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 HNRNPLP14866 589 aaKnown RBP eCLIP6.47□□□□□ -1.37
SSR3-209ENST00000498205 SLC5A3P53794 718 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 LGALS4P56470 323 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 DUSP8Q13202 625 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 GRM7Q14831 915 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 CT83Q5H943 113 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 MFSD5Q6N075 450 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 ZNF662Q6ZS27 426 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 TAS1R1Q7RTX1 841 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 CMTM4Q8IZR5 234 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 FUKQ8N0W3 1084 aa6.47□□□□□ -1.37
SSR3-209ENST00000498205 Q8TCH9 128 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms