RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 KCNH2Q12809 1159 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 BFSP1Q12934 665 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 MYBPC2Q14324 1141 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 MTF1Q14872 753 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 PTPN14Q15678 1187 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 HSDL1Q3SXM5 330 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 CCDC62Q6P9F0 684 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 RAD9BQ6WBX8 426 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 NYAP1Q6ZVC0 841 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 CACNA2D4Q7Z3S7 1137 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 SAPCD2Q86UD0 394 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 SLC9A9Q8IVB4 645 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 CCDC155Q8N6L0 562 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 TMEM161BQ8NDZ6 487 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 OR8K1Q8NGG5 319 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 ASAP3Q8TDY4 903 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 ATP8B4Q8TF62 1192 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 MAML3Q96JK9 1138 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 NIFKQ9BYG3 293 aaKnown RBP8.83□□□□□ -1
PDZRN3-212ENST00000498048 DHX33Q9H6R0 707 aaKnown RBP8.83□□□□□ -1
PDZRN3-212ENST00000498048 PDGFCQ9NRA1 345 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 NRBP2Q9NSY0 501 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 WDR70Q9NW82 654 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 SLC5A4Q9NY91 659 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 HSPBP1Q9NZL4 362 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 CEP72Q9P209 647 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 ARHGAP28Q9P2N2 729 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 ZHX1Q9UKY1 873 aaPredicted RBP8.83□□□□□ -1
PDZRN3-212ENST00000498048 ABT1Q9ULW3 272 aaKnown RBP8.83□□□□□ -1
PDZRN3-212ENST00000498048 TLL2Q9Y6L7 1015 aa8.83□□□□□ -1
PDZRN3-212ENST00000498048 LRRC53A6NM62 1247 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 TISP43B9A030 160 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 RNF225M0QZC1 329 aaPredicted RBP8.82□□□□□ -1
PDZRN3-212ENST00000498048 EPHB6O15197 1021 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 N4BP1O75113 896 aaKnown RBP8.82□□□□□ -1
PDZRN3-212ENST00000498048 LGALS2P05162 132 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 TRIM49P0CI25 452 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 TRIM49CP0CI26 452 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 CYLC1P35663 651 aaPredicted RBP8.82□□□□□ -1
PDZRN3-212ENST00000498048 ADCYAP1R1P41586 468 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 NAMPTP43490 491 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 SLC26A2P50443 739 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 STRN3Q13033 797 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 MEA1Q16626 185 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 GJC2Q5T442 439 aaPredicted RBP8.82□□□□□ -1
PDZRN3-212ENST00000498048 PDXDC1Q6P996 788 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 GBP6Q6ZN66 633 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 INTS8Q75QN2 995 aaKnown RBP8.82□□□□□ -1
PDZRN3-212ENST00000498048 XXYLT1Q8NBI6 393 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 SMC1BQ8NDV3 1235 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 ACRBPQ8NEB7 543 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 DEPTORQ8TB45 409 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 SLC35C1Q96A29 364 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 TMEM143Q96AN5 459 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 CBWD1Q9BRT8 395 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 CRACR2AQ9BSW2 395 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 KATNBL1Q9H079 304 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 GANQ9H2C0 597 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 SMARCAD1Q9H4L7 1026 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 GPBP1L1Q9HC44 474 aaPredicted RBP8.82□□□□□ -1
PDZRN3-212ENST00000498048 PDLIM7Q9NR12 457 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 AGPAT5Q9NUQ2 364 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 DMAC2Q9NW81 257 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 TBX20Q9UMR3 447 aa8.82□□□□□ -1
PDZRN3-212ENST00000498048 R3HCC1Q9Y3T6 440 aaKnown RBP8.82□□□□□ -1
PDZRN3-212ENST00000498048 RBM47A0AV96 593 aaKnown RBP8.81□□□□□ -1
PDZRN3-212ENST00000498048 GTPBP10A4D1E9 387 aaKnown RBP8.81□□□□□ -1
PDZRN3-212ENST00000498048 RASSF10A6NK89 507 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 IPO7O95373 1038 aaKnown RBP8.81□□□□□ -1
PDZRN3-212ENST00000498048 ADRB2P07550 413 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 ZNF286BP0CG31 522 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 SCP2P22307 547 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 GLRA2P23416 452 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 FMO5P49326 533 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 LIG4P49917 911 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 POLR2FP61218 127 aaKnown RBP8.81□□□□□ -1
PDZRN3-212ENST00000498048 KCNMA1Q12791 1236 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 MAP2K5Q13163 448 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 LAMC2Q13753 1193 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 RAPGEF1Q13905 1077 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 CAPSQ13938 189 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 PLCB4Q15147 1175 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 TARBP2Q15633 366 aaKnown RBP8.81□□□□□ -1
PDZRN3-212ENST00000498048 EXOC3L4Q17RC7 722 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 TDRD12Q587J7 1177 aaKnown RBP8.81□□□□□ -1
PDZRN3-212ENST00000498048 TAPT1Q6NXT6 567 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 MAMDC4Q6UXC1 1216 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 PLPPR4Q7Z2D5 763 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 MSL3Q8N5Y2 521 aaKnown RBP8.81□□□□□ -1
PDZRN3-212ENST00000498048 OR6J1Q8NGC5 347 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 PPTC7Q8NI37 304 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 NPLOC4Q8TAT6 608 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 TCP11Q8WWU5 503 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 SOCS4Q8WXH5 440 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 BAP1Q92560 729 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 ZNF592Q92610 1267 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 SAAL1Q96ER3 474 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 CEP89Q96ST8 783 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 APBA2Q99767 749 aa8.81□□□□□ -1
PDZRN3-212ENST00000498048 JPH2Q9BR39 696 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms