RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CT83Q5H943 113 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 PITRM1Q5JRX3 1037 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 FAM177A1Q8N128 213 aaPredicted RBP3.96□□□□□ -1.78
RIF1-212ENST00000498041 TTC9BQ8N6N2 239 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 OR14C36Q8NHC7 312 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 PPP1R14CQ8TAE6 165 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 ZCRB1Q8TBF4 217 aaKnown RBP3.96□□□□□ -1.78
RIF1-212ENST00000498041 LMBR1Q8WVP7 490 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 RABGGTAQ92696 567 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 EAF2Q96CJ1 260 aaPredicted RBP3.96□□□□□ -1.78
RIF1-212ENST00000498041 AHCYL2Q96HN2 611 aaKnown RBP3.96□□□□□ -1.78
RIF1-212ENST00000498041 UIMC1Q96RL1 719 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 NELFAQ9H3P2 528 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 VTA1Q9NP79 307 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.96□□□□□ -1.78
RIF1-212ENST00000498041 SLC5A4Q9NY91 659 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 PRSS50Q9UI38 385 aa3.96□□□□□ -1.78
RIF1-212ENST00000498041 ZCCHC6Q5VYS8 1495 aaKnown RBP3.96□□□□□ -1.78
RIF1-212ENST00000498041 ANKRD62A6NC57 917 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 PATE3B3GLJ2 98 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 PRKD3O94806 890 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 SEC24DO94855 1032 aaPredicted RBP3.95□□□□□ -1.78
RIF1-212ENST00000498041 LPLP06858 475 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 CDK11BP21127 795 aaKnown RBP3.95□□□□□ -1.78
RIF1-212ENST00000498041 LGALS4P56470 323 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 SCAND1P57086 179 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 BPIFB4P59827 614 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 AMPD3Q01432 767 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 TRIM25Q14258 630 aaKnown RBP3.95□□□□□ -1.78
RIF1-212ENST00000498041 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.95□□□□□ -1.78
RIF1-212ENST00000498041 GAGE13Q4V321 117 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 TCTN3Q6NUS6 607 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 LMBR1LQ6UX01 489 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 GAREM2Q75VX8 874 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 NECAB2Q7Z6G3 386 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 LYSMD2Q8IV50 215 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 SLC41A1Q8IVJ1 513 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 GLB1L2Q8IW92 636 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 UNC5BQ8IZJ1 945 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 ANKRD53Q8N9V6 530 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 SHCBP1Q8NEM2 672 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 CHST13Q8NET6 341 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 DNERQ8NFT8 737 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 COG1Q8WTW3 980 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 RAX2Q96IS3 184 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 C8orf49Q96NF6 230 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 PLA2G12BQ9BX93 195 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 PUS7LQ9H0K6 701 aaKnown RBP3.95□□□□□ -1.78
RIF1-212ENST00000498041 KCTD10Q9H3F6 313 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 C14orf93Q9H972 538 aaKnown RBP3.95□□□□□ -1.78
RIF1-212ENST00000498041 C14orf119Q9NWQ9 140 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 ZFR2Q9UPR6 939 aaKnown RBP3.95□□□□□ -1.78
RIF1-212ENST00000498041 COL4A3BPQ9Y5P4 624 aa3.95□□□□□ -1.78
RIF1-212ENST00000498041 LOC105371045A0A1W2PR82 267 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 K7ESF4 209 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 FOXS1O43638 330 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 ZNF623O75123 536 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 RAD17O75943 681 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 TOX4O94842 621 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 LY86O95711 162 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 JUNP05412 331 aaKnown RBP3.94□□□□□ -1.78
RIF1-212ENST00000498041 VSIG10L2P0DP72 767 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 GAAP10253 952 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 KIR2DL3P43628 341 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 HMGA2P52926 109 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 MRPS9P82933 396 aaKnown RBP3.94□□□□□ -1.78
RIF1-212ENST00000498041 CD69Q07108 199 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 DUSP8Q13202 625 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 RIN1Q13671 783 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 SPIDRQ14159 915 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 ICAM4Q14773 271 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 ACAP1Q15027 740 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 KRT40Q6A162 431 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 ZFPM1Q8IX07 1006 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 CMIPQ8IY22 773 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 GPR135Q8IZ08 494 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 Q8TCH9 128 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 RPL10LQ96L21 214 aaKnown RBP3.94□□□□□ -1.78
RIF1-212ENST00000498041 OR14A2Q96R54 314 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 ORAI2Q96SN7 254 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 FDXACB1Q9BRP7 624 aaPredicted RBP3.94□□□□□ -1.78
RIF1-212ENST00000498041 MENTQ9BUN1 341 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 BRINP2Q9C0B6 783 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 SCAND2PQ9GZW5 306 aaPredicted RBP3.94□□□□□ -1.78
RIF1-212ENST00000498041 PRDM12Q9H4Q4 367 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 PCDH12Q9NPG4 1184 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 EVLQ9UI08 416 aaPredicted RBP3.94□□□□□ -1.78
RIF1-212ENST00000498041 CDY2AQ9Y6F7 541 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 SLC30A1Q9Y6M5 507 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 WASHC2AQ641Q2 1341 aa3.94□□□□□ -1.78
RIF1-212ENST00000498041 A0A1W2PR48 441 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 A0A1W2PRX2 142 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 MTSS1O43312 755 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 MTHFD2P13995 350 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 IBSPP21815 317 aaPredicted RBP3.93□□□□□ -1.78
RIF1-212ENST00000498041 CDKN1CP49918 316 aaPredicted RBP3.93□□□□□ -1.78
RIF1-212ENST00000498041 GUCY2FP51841 1108 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 ERVK-21P61565 698 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 ADAM8P78325 824 aa3.93□□□□□ -1.78
RIF1-212ENST00000498041 MGAT5Q09328 741 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms