RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 RSRC2Q7L4I2 434 aaKnown RBP8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 SH3BP5LQ7L8J4 393 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 GLYCTKQ8IVS8 523 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 TRIM59Q8IWR1 403 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 CCDC26Q8TAB7 109 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 MKNK1Q9BUB5 465 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 TRIOBPQ9H2D6 2365 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 ANXA13P27216 316 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 HERVK_113P62684 666 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 KRT76Q01546 638 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 EHHADHQ08426 723 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 PAK2Q13177 524 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 DMP1Q13316 513 aaPredicted RBP8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 MIIPQ5JXC2 388 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 BANK1Q8NDB2 785 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 NSUN6Q8TEA1 469 aaKnown RBP8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 KIFAP3Q92845 792 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 POLD4Q9HCU8 107 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 MED4Q9NPJ6 270 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 HDAC6Q9UBN7 1215 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 AMFRQ9UKV5 643 aa8.65□□□□□ -1.02
HLA-DMB-262ENST00000498020 LAMB2P55268 1798 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 SRGAP2O75044 1071 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 ICAM1P05362 532 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 CCND2P30279 289 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 ARHGAP25P42331 645 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 TRPC3Q13507 836 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 VGLL4Q14135 290 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 SLC18A3Q16572 532 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 LRRC55Q6ZSA7 311 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 SND1Q7KZF4 910 aaKnown RBP eCLIP8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 YME1L1Q96TA2 773 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 UBE2OQ9C0C9 1292 aaKnown RBP8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 STMN4Q9H169 189 aaPredicted RBP8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 SLC28A3Q9HAS3 691 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 FBXO28Q9NVF7 368 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 CCDC88AQ3V6T2 1871 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 NHSQ6T4R5 1651 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 UBE4BO95155 1302 aa8.65□□□□□ -1.03
HLA-DMB-262ENST00000498020 WDR64B1ANS9 1081 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 KCNK3O14649 394 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 NMT1P30419 496 aaKnown RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 SFNP31947 248 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 VEGFBP49765 207 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 SLC12A3P55017 1021 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 OSTNP61366 133 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 INTS8Q75QN2 995 aaKnown RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 SAMD3Q8N6K7 520 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 IFT81Q8WYA0 676 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 NSRP1Q9H0G5 558 aaKnown RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 SNX12Q9UMY4 172 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 TRAF3IP3Q9Y228 551 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 SIK3Q9Y2K2 1263 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 NFKBIEO00221 500 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 DPYSL4O14531 572 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 SLC8A3P57103 927 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 RNASE9P60153 205 aaKnown RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 BAATQ14032 418 aaPredicted RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 ZNF662Q6ZS27 426 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 TRAPPC11Q7Z392 1133 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 ETNPPLQ8TBG4 499 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 OLFML3Q9NRN5 406 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 ARHGAP20Q9P2F6 1191 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 BCORQ6W2J9 1755 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 SPTBN2O15020 2390 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 MYH13Q9UKX3 1938 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 RREB1Q92766 1687 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 TBC1D12O60347 775 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 GFPT2O94808 682 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 SP100P23497 879 aaPredicted RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 MAPK4P31152 587 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 CLUL1Q15846 466 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 CCDC157Q569K6 752 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 CFAP58Q5T655 872 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 PAPD7Q5XG87 772 aaKnown RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 WDR59Q6PJI9 974 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 CTU1Q7Z7A3 348 aaKnown RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 CDAN1Q8IWY9 1227 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 LRRN4CLQ8ND94 238 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 OSBPL9Q96SU4 736 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 TIPINQ9BVW5 301 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 LACRTQ9GZZ8 138 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 IGFLR1Q9H665 355 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 PDE11AQ9HCR9 933 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 MAP3K20Q9NYL2 800 aaKnown RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 MSRAQ9UJ68 235 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 DAAM1Q9Y4D1 1078 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 RNF225M0QZC1 329 aaPredicted RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 UCHL3P15374 230 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 GJC1P36383 396 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 ARL1P40616 181 aaPredicted RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 PSMC6P62333 389 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 MLLT1Q03111 559 aaPredicted RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 DMTNQ08495 405 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 CASP8Q14790 479 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 GSTA5Q7RTV2 222 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 FAM71BQ8TC56 605 aa8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 RANBP17Q9H2T7 1088 aaKnown RBP8.64□□□□□ -1.03
HLA-DMB-262ENST00000498020 CTTNBP2NLQ9P2B4 639 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms