RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ARL8AQ96BM9 186 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 OSBPL6Q9BZF3 934 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 ENKD1Q9H0I2 346 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 MTG2Q9H4K7 406 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 NCDNQ9UBB6 729 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 FZD1Q9UP38 647 aa5.94□□□□□ -1.46
SMC4-227ENST00000497984 PRPF6O94906 941 aaKnown RBP5.93□□□□□ -1.46
SMC4-227ENST00000497984 GCP02774 474 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 BMP5P22003 454 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 ZFP36P26651 326 aaKnown RBP5.93□□□□□ -1.46
SMC4-227ENST00000497984 NPEPPSP55786 919 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 ADCY2Q08462 1091 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 SOGA3Q5TF21 947 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 PIK3R6Q5UE93 754 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 DPY19L2P1Q6NXN4 242 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 APBB1IPQ7Z5R6 666 aaPredicted RBP5.93□□□□□ -1.46
SMC4-227ENST00000497984 CXorf67Q86X51 503 aaPredicted RBP5.93□□□□□ -1.46
SMC4-227ENST00000497984 VRK3Q8IV63 474 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 GPR150Q8NGU9 434 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 PPP1R14CQ8TAE6 165 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 HS3ST4Q9Y661 456 aa5.93□□□□□ -1.46
SMC4-227ENST00000497984 OPHN1O60890 802 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 ITGB1P05556 798 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 GAAP10253 952 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 RANGAP1P46060 587 aaPredicted RBP5.92□□□□□ -1.46
SMC4-227ENST00000497984 SQSTM1Q13501 440 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 FAM214AQ32MH5 1076 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 KIAA1841Q6NSI8 718 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 LRRC55Q6ZSA7 311 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 PHYKPLQ8IUZ5 450 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 C7orf31Q8N865 590 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 PMFBP1Q8TBY8 1022 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 MYL10Q9BUA6 226 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 SYNPO2Q9UMS6 1093 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 SPO11Q9Y5K1 396 aa5.92□□□□□ -1.46
SMC4-227ENST00000497984 GRID2IPA4D2P6 1211 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 CFBP00751 764 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 GNAT2P19087 354 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 HK1P19367 917 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 SDSP20132 328 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 PIK3C3Q8NEB9 887 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 PROKR1Q8TCW9 393 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 RTF1Q92541 710 aaKnown RBP5.91□□□□□ -1.46
SMC4-227ENST00000497984 UIMC1Q96RL1 719 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 POFUT1Q9H488 388 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 ING3Q9NXR8 418 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 TNFRSF18Q9Y5U5 241 aa5.91□□□□□ -1.46
SMC4-227ENST00000497984 HOXA3O43365 443 aaPredicted RBP5.9□□□□□ -1.46
SMC4-227ENST00000497984 FSBPO95073 299 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 LMNAP02545 664 aaKnown RBP5.9□□□□□ -1.46
SMC4-227ENST00000497984 JMJD7P0C870 316 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 PTTG1IPP53801 180 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 MAN2A1Q16706 1144 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 LY6G5CQ5SRR4 150 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 CDCA2Q69YH5 1023 aaPredicted RBP5.9□□□□□ -1.46
SMC4-227ENST00000497984 SYNE4Q8N205 404 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 VOPP1Q96AW1 172 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 NOL10Q9BSC4 688 aaKnown RBP5.9□□□□□ -1.46
SMC4-227ENST00000497984 ZMAT4Q9H898 229 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 OXSMQ9NWU1 459 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 SORCS3Q9UPU3 1222 aa5.9□□□□□ -1.46
SMC4-227ENST00000497984 COL4A3Q01955 1670 aa5.9□□□□□ -1.47
SMC4-227ENST00000497984 TRIM24O15164 1050 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 RHOBTB3O94955 611 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 APOL3O95236 402 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 ABHD16AO95870 558 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 FBLP22087 321 aaKnown RBP5.89□□□□□ -1.47
SMC4-227ENST00000497984 METTL24Q5JXM2 366 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 TIGD7Q6NT04 549 aaPredicted RBP5.89□□□□□ -1.47
SMC4-227ENST00000497984 UNC5BQ8IZJ1 945 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 CPT1CQ8TCG5 803 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 PDCD2LQ9BRP1 358 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 ORAI3Q9BRQ5 295 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 KANSL2Q9H9L4 492 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 H2AFY2Q9P0M6 372 aaPredicted RBP5.89□□□□□ -1.47
SMC4-227ENST00000497984 PACSIN3Q9UKS6 424 aa5.89□□□□□ -1.47
SMC4-227ENST00000497984 CDK11AQ9UQ88 783 aaPredicted RBP5.89□□□□□ -1.47
SMC4-227ENST00000497984 AHRRA9YTQ3 701 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 ELL2O00472 640 aaPredicted RBP5.88□□□□□ -1.47
SMC4-227ENST00000497984 MAFGO15525 162 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 ATP2A2P16615 1042 aaKnown RBP5.88□□□□□ -1.47
SMC4-227ENST00000497984 PTPAQ15257 358 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 KCNV1Q6PIU1 500 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 UBE2R2Q712K3 238 aaPredicted RBP5.88□□□□□ -1.47
SMC4-227ENST00000497984 ZZZ3Q8IYH5 903 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 OR52N2Q8NGI0 321 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 HIST1H2AHQ96KK5 128 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 HIST1H2AJQ99878 128 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 CPEB1Q9BZB8 566 aaKnown RBP5.88□□□□□ -1.47
SMC4-227ENST00000497984 OSBPL2Q9H1P3 480 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 ZNF768Q9H5H4 540 aaKnown RBP5.88□□□□□ -1.47
SMC4-227ENST00000497984 TOMM22Q9NS69 142 aa5.88□□□□□ -1.47
SMC4-227ENST00000497984 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.88□□□□□ -1.47
SMC4-227ENST00000497984 NRP1O14786 923 aa5.87□□□□□ -1.47
SMC4-227ENST00000497984 PPP1R12AO14974 1030 aaPredicted RBP5.87□□□□□ -1.47
SMC4-227ENST00000497984 PPFIA4O75335 1185 aa5.87□□□□□ -1.47
SMC4-227ENST00000497984 ALDH1A2O94788 518 aa5.87□□□□□ -1.47
SMC4-227ENST00000497984 SCAF4O95104 1147 aaKnown RBP5.87□□□□□ -1.47
SMC4-227ENST00000497984 FLT3P36888 993 aa5.87□□□□□ -1.47
SMC4-227ENST00000497984 CD69Q07108 199 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms