RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 BARX2Q9UMQ3 279 aaPredicted RBP13.17□□□□□ -0.3
NUDCD3-211ENST00000497978 CARNS1A5YM72 827 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 GLP2RO95838 553 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 KRT2P35908 639 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 RFC5P40937 340 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 PHKA2P46019 1235 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 ALDH7A1P49419 539 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 RAB27AP51159 221 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 POLGP54098 1239 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 EPHA7Q15375 998 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 ERICH6BQ5W0A0 696 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 ZNF598Q86UK7 904 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 OXER1Q8TDS5 423 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 TRAIPQ9BWF2 469 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 GJB4Q9NTQ9 266 aa13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 PIN4Q9Y237 131 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-211ENST00000497978 GAS2O43903 313 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 CTDNEP1O95476 244 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 YWHABP31946 246 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 PBX3P40426 434 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 NPEPPSP55786 919 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 TRIM29Q14134 588 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 SMC1AQ14683 1233 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 NCAPH2Q6IBW4 605 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 GLB1LQ6UWU2 654 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 KSR1Q8IVT5 923 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 C4orf19Q8IY42 314 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 TCP11Q8WWU5 503 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 PSPC1Q8WXF1 523 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 HAS1Q92839 578 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 PGBD4Q96DM1 585 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 LXNQ9BS40 222 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 ZSWIM4Q9H7M6 989 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 COL4A3BPQ9Y5P4 624 aa13.15□□□□□ -0.3
NUDCD3-211ENST00000497978 ASAP2O43150 1006 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 SRGAP2CP0DJJ0 459 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 ATF7P17544 494 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 TECP42680 631 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 BCAR1P56945 870 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 ME3Q16798 604 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 HERC4Q5GLZ8 1057 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 TMEM184AQ6ZMB5 413 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 SLC39A11Q8N1S5 342 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 NECAB1Q8N987 351 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 PRPF31Q8WWY3 499 aaKnown RBP13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 TMEM169Q96HH4 297 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 PHF7Q9BWX1 381 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 DHX33Q9H6R0 707 aaKnown RBP13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 RYDENQ9NUL5 291 aaKnown RBP13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 FAM105AQ9NUU6 356 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 MUTYHQ9UIF7 546 aa13.14□□□□□ -0.31
NUDCD3-211ENST00000497978 DTNBO60941 627 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 ZNF623O75123 536 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 ZC3H11AO75152 810 aaKnown RBP eCLIP13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 FDPSP14324 419 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 HOXB8P17481 243 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 CA8P35219 290 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 NEK4P51957 841 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 RNASELQ05823 741 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 NR5A1Q13285 461 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 CTTNQ14247 550 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 LONRF3Q496Y0 759 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 NOMO2Q5JPE7 1267 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 ANKRD54Q6NXT1 300 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 LLGL2Q6P1M3 1020 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 TPH2Q8IWU9 490 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 URGCPQ8TCY9 931 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 LPPQ93052 612 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 TMEM143Q96AN5 459 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 IFT122Q9HBG6 1241 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 RGL1Q9NZL6 768 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 PCDHA12Q9UN75 941 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
NUDCD3-211ENST00000497978 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 HIDE1A8MVS5 230 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 LOC730098B7Z3J9 87 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 NT5C1B-RDH14C9J2C7 533 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 CYP4A11Q02928 519 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 LAMTOR4Q0VGL1 99 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 KCNC3Q14003 757 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 GIT2Q14161 759 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 EMC2Q15006 297 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 CALCRLQ16602 461 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 EARS2Q5JPH6 523 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-211ENST00000497978 MRPL43Q8N983 215 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms