RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MYOGP15173 224 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 ARL2P36404 184 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 NASPP49321 788 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-208ENST00000497892 HTRA4P83105 476 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-208ENST00000497892 MXD4Q14582 209 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-208ENST00000497892 PADI6Q6TGC4 694 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 NYAP1Q6ZVC0 841 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 Q7L0L9 218 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 RTN4RL1Q86UN2 441 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-208ENST00000497892 PACS2Q86VP3 889 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 DEFB123Q8N688 67 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 TOP1MTQ969P6 601 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 PNMA5Q96PV4 448 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 GCOM2Q9BZD3 368 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-208ENST00000497892 NT5C3AQ9H0P0 336 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 NKX2-4Q9H2Z4 354 aa12.49□□□□□ -0.41
ERCC8-208ENST00000497892 E9PMD0 336 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 MGEA5O60502 916 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 EYA4O95677 639 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 CYP11B2P19099 503 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 SFPQP23246 707 aaKnown RBP eCLIP12.48□□□□□ -0.41
ERCC8-208ENST00000497892 UBA7P41226 1012 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
ERCC8-208ENST00000497892 GRB10Q13322 594 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 CAPSQ13938 189 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 DSC3Q14574 896 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 SLC39A14Q15043 492 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 TMEM119Q4V9L6 283 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
ERCC8-208ENST00000497892 PPP2R2DQ66LE6 453 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 KCNK18Q7Z418 384 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 CABP7Q86V35 215 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 CRIPAKQ8N1N5 446 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 RNF149Q8NC42 400 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 ASAP3Q8TDY4 903 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
ERCC8-208ENST00000497892 ZNF396Q96N95 335 aaPredicted RBP12.48□□□□□ -0.41
ERCC8-208ENST00000497892 RAD9AQ99638 391 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 INO80BQ9C086 356 aaPredicted RBP12.48□□□□□ -0.41
ERCC8-208ENST00000497892 POLR3FQ9H1D9 316 aaPredicted RBP12.48□□□□□ -0.41
ERCC8-208ENST00000497892 SLC28A3Q9HAS3 691 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 GPRC5CQ9NQ84 441 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 RGS18Q9NS28 235 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 C1orf112Q9NSG2 853 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 DNM3Q9UQ16 869 aa12.48□□□□□ -0.41
ERCC8-208ENST00000497892 SRPRBQ9Y5M8 271 aaKnown RBP12.48□□□□□ -0.41
ERCC8-208ENST00000497892 RALGAPA2Q2PPJ7 1873 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 NLRC5Q86WI3 1866 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 DENND3A2RUS2 1198 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 LCHNA4D1U4 455 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 CSDE1O75534 798 aaKnown RBP12.47□□□□□ -0.41
ERCC8-208ENST00000497892 SRGAP2CP0DJJ0 459 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 GLRA2P23416 452 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 MARCKSP29966 332 aaPredicted RBP12.47□□□□□ -0.41
ERCC8-208ENST00000497892 PHKA2P46019 1235 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 POU5F1BQ06416 359 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 TFDP1Q14186 410 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 ZRSR1Q15695 479 aaKnown RBP12.47□□□□□ -0.41
ERCC8-208ENST00000497892 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 NPAS4Q8IUM7 802 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 LINC00301Q8NCQ3 95 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 CDK5RAP3Q96JB5 506 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 ADAM2Q99965 735 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 NFKBIZQ9BYH8 718 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 CSRNP2Q9H175 543 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 SEMA6BQ9H3T3 888 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 ZNF576Q9H609 170 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 MINDY3Q9H8M7 445 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 RC3H2Q9HBD1 1191 aaKnown RBP12.47□□□□□ -0.41
ERCC8-208ENST00000497892 MTMR10Q9NXD2 777 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 INSL6Q9Y581 213 aa12.47□□□□□ -0.41
ERCC8-208ENST00000497892 COL4A4P53420 1690 aaPredicted RBP12.47□□□□□ -0.41
ERCC8-208ENST00000497892 TRANK1O15050 2925 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 C9IYK1 514 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 ARHGEF15O94989 841 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 UPP2O95045 317 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 YEATS4O95619 227 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 BRD1O95696 1058 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 FGFR4P22455 802 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 SARSP49591 514 aaKnown RBP12.46□□□□□ -0.41
ERCC8-208ENST00000497892 PRSS12P56730 875 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 PTENP60484 403 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 TAP1Q03518 808 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 STK38Q15208 465 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 FAM102BQ5T8I3 360 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 SLC24A5Q71RS6 500 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 MAEAQ7L5Y9 396 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 KRI1Q8N9T8 703 aaKnown RBP12.46□□□□□ -0.41
ERCC8-208ENST00000497892 CALML4Q96GE6 196 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 FAM161BQ96MY7 647 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 GUCD1Q96NT3 240 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 YME1L1Q96TA2 773 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 PLIN2Q99541 437 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 CCSER1Q9C0I3 900 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 CHST12Q9NRB3 414 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 AGPAT5Q9NUQ2 364 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 ZDHHC9Q9Y397 364 aa12.46□□□□□ -0.41
ERCC8-208ENST00000497892 FNDC1Q4ZHG4 1894 aaPredicted RBP12.46□□□□□ -0.42
ERCC8-208ENST00000497892 KIAA1671Q9BY89 1806 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms