RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 MAP3K7O43318 606 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 RIPK2O43353 540 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 STARD3NLO95772 234 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 TPBGLP0DKB5 382 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 CCNFP41002 786 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 GRB10Q13322 594 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 EPM2AIP1Q7L775 607 aaPredicted RBP11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 NT5DC3Q86UY8 548 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 DZIP1Q86YF9 867 aaKnown RBP11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 ATG4AQ8WYN0 398 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 RBM41Q96IZ5 413 aaKnown RBP11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 KLF6Q99612 283 aaPredicted RBP11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 HEMGNQ9BXL5 484 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 DENND2DQ9H6A0 471 aaPredicted RBP11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 VPS37BQ9H9H4 285 aa11.4□□□□□ -0.59
TRAPPC12-223ENST00000497597 PFASO15067 1338 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 A6NHS1 94 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 PEX11AO75192 247 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 GCNT3O95395 438 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 CYP2J2P51589 502 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 KRT25Q7Z3Z0 450 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 COL23A1Q86Y22 540 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 UBL4BQ8N7F7 174 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 C1orf131Q8NDD1 294 aaKnown RBP11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 PGM2Q96G03 612 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 PIGSQ96S52 555 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 NDNQ99608 321 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 CCDC77Q9BR77 488 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 ISCA1Q9BUE6 129 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 VCX3BQ9H321 246 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 VCX3AQ9NNX9 186 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 ARHGEF3Q9NR81 526 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 TBX22Q9Y458 520 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 LTBP4Q8N2S1 1624 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 PDE8AO60658 829 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 LCA5LO95447 670 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 AFPP02771 609 aaKnown RBP11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 ATP5DP30049 168 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 CETN2P41208 172 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 GCLCP48506 637 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 STRN3Q13033 797 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 TAF1BQ53T94 588 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 CAVIN4Q5BKX8 364 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 CEP70Q8NHQ1 597 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 ZCRB1Q8TBF4 217 aaKnown RBP11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 ATP8B4Q8TF62 1192 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 CENPTQ96BT3 561 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 ARHGEF26Q96DR7 871 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 FAM161BQ96MY7 647 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 GALNT8Q9NY28 637 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 MYH2Q9UKX2 1941 aa11.39□□□□□ -0.59
TRAPPC12-223ENST00000497597 PASKQ96RG2 1323 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 KIAA0391O15091 583 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 GNA11P29992 359 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 EVA1CP58658 441 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 KPNB1Q14974 876 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 KHDC1Q4VXA5 237 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 DRAXINQ8NBI3 349 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 ALG3Q92685 438 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 MXD3Q9BW11 206 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 THAP2Q9H0W7 228 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 IKZF4Q9H2S9 585 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 RIC8AQ9NPQ8 531 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 ZNF711Q9Y462 761 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 ADAMTS13Q76LX8 1427 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 TCRBV7S2A1N4TA0A589 114 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 POTECB2RU33 542 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 DDX3XO00571 662 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 HNRNPCP07910 306 aaKnown RBP eCLIP11.38□□□□□ -0.592e-6■■■□□ 14.6
TRAPPC12-223ENST00000497597 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 MTDHQ86UE4 582 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 MYLK4Q86YV6 388 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 THEMISQ8N1K5 641 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 SLC25A41Q8N5S1 370 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 FBXO41Q8TF61 875 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 PREBQ9HCU5 417 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 BLOC1S4Q9NUP1 217 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 TTC7AQ9ULT0 858 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 HNRNPRO43390 633 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 ATP6V1G1O75348 118 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 TRIM49P0CI25 452 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 TRIM49CP0CI26 452 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 GM2AP17900 193 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 VHLP40337 213 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 CASP4P49662 377 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 BTKQ06187 659 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 MCL1Q07820 350 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 THOC5Q13769 683 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 MPP2Q14168 576 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 CPNE8Q86YQ8 564 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 AGGF1Q8N302 714 aaeCLIP11.38□□□□□ -0.591e-8■□□□□ 9.3
TRAPPC12-223ENST00000497597 KLHL23Q8NBE8 558 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 HIC2Q96JB3 615 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 AK8Q96MA6 479 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 CARD9Q9H257 536 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 PRDM11Q9NQV5 511 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 TAS2R14Q9NYV8 317 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 WDR35Q9P2L0 1181 aa11.38□□□□□ -0.59
TRAPPC12-223ENST00000497597 PHTF1Q9UMS5 762 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms