RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CTTNBP2NLQ9P2B4 639 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 DCTN4Q9UJW0 460 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 VHLP40337 213 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 RASSF2P50749 326 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 CTTNQ14247 550 aaKnown RBP14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 IRGCQ6NXR0 463 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 STMN2Q93045 179 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 PNMA5Q96PV4 448 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 MYH4Q9Y623 1939 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 THAP12O43422 761 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 HSPA2P54652 639 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 MCL1Q07820 350 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 OR52E8Q6IFG1 317 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 PRUNE1Q86TP1 453 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.03□□□□□ -0.167e-7■■■■■ 56
GAPVD1-220ENST00000497580 GALNT8Q9NY28 637 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 AJAP1Q9UKB5 411 aaPredicted RBP14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 CHKBQ9Y259 395 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 BCS1LQ9Y276 419 aa14.03□□□□□ -0.16
GAPVD1-220ENST00000497580 PVALEFA0A1B0GWK0 134 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 KDM4FA0A1W2PPD8 638 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 WDR91A4D1P6 747 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 USP17L3A6NCW0 530 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 USP17L4A6NCW7 530 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 FAM187AA6NFU0 413 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 WFS1O76024 890 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 TDP2O95551 362 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 CCNB1P14635 433 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 EAPPQ56P03 285 aaPredicted RBP14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 HS2ST1Q7LGA3 356 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 USP17L1Q7RTZ2 530 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 KRT35Q92764 455 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 OPTNQ96CV9 577 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 HES6Q96HZ4 224 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 USP40Q9NVE5 1235 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 LRCH1Q9Y2L9 728 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 NFAT5O94916 1531 aa14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 DDX60Q8IY21 1712 aaKnown RBP14.02□□□□□ -0.16
GAPVD1-220ENST00000497580 TOM1O60784 492 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 FOXN2P32314 431 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 ZRSR2Q15696 482 aaKnown RBP14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 SGSM1Q2NKQ1 1148 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 CROCCP2Q86T23 111 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 TRIM59Q8IWR1 403 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 SEC14L1Q92503 715 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 PCDHB13Q9Y5F0 798 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 TTC36A6NLP5 189 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 MAPK13O15264 365 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 RASA1P20936 1047 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 POLGP54098 1239 aaPredicted RBP14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 CDR2Q01850 454 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 ARHGAP44Q17R89 818 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 CERKLQ49MI3 558 aaPredicted RBP14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 CCDC152Q4G0S7 254 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 C10orf76Q5T2E6 689 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 CYP4F22Q6NT55 531 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 DSTYKQ6XUX3 929 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 ARHGEF18Q6ZSZ5 1173 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 CEP128Q6ZU80 1094 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 CYP4X1Q8N118 509 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 RAD54LQ92698 747 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 ABTB1Q969K4 478 aaPredicted RBP14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 MCUR1Q96AQ8 359 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 ARHGEF26Q96DR7 871 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 ZNF333Q96JL9 665 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 ANKRD27Q96NW4 1050 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 CYTH2Q99418 400 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 LRMDAQ9H2I8 198 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 MMADHCQ9H3L0 296 aaPredicted RBP14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 MCM9Q9NXL9 1143 aa14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 NIP7Q9Y221 180 aaKnown RBP eCLIP14.02□□□□□ -0.17
GAPVD1-220ENST00000497580 LAD1O00515 517 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 CCNFP41002 786 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 MESDQ14696 234 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 TAF1BQ53T94 588 aaPredicted RBP14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 TTC27Q6P3X3 843 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 DYNLL2Q96FJ2 89 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 DNAAF2Q9NVR5 837 aaKnown RBP14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 GCNT4Q9P109 453 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 PITPNM2Q9BZ72 1349 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 TCRBV7S2A1N4TA0A589 114 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 PDE8AO60658 829 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 TNNI2P48788 182 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 STRN3Q13033 797 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 DHX34Q14147 1143 aaKnown RBP14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 KPNB1Q14974 876 aaKnown RBP14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 MTFR1Q15390 333 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 CFAP157Q5JU67 520 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 HP1BP3Q5SSJ5 553 aaPredicted RBP14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 MKNK2Q9HBH9 465 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 LMTK3Q96Q04 1460 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 LRP6O75581 1613 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 E9PMD0 336 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 LRRN2O75325 713 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 RARGP13631 454 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 ATP5DP30049 168 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 IL9RQ01113 521 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 DBN1Q16643 649 aa14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 MYLK4Q86YV6 388 aaPredicted RBP14.01□□□□□ -0.17
GAPVD1-220ENST00000497580 VPS52Q8N1B4 723 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms