RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 C11orf16Q9NQ32 467 aa22.15■■□□□ 1.14
CTSD-206ENST00000497544 DACT1Q9NYF0 836 aa22.15■■□□□ 1.14
CTSD-206ENST00000497544 CXXC1Q9P0U4 656 aaPredicted RBP22.15■■□□□ 1.14
CTSD-206ENST00000497544 KCNG1Q9UIX4 513 aa22.15■■□□□ 1.14
CTSD-206ENST00000497544 HOOK1Q9UJC3 728 aaKnown RBP22.15■■□□□ 1.14
CTSD-206ENST00000497544 CHRNA1P02708 482 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 IQCF3P0C7M6 154 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 IDEP14735 1019 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 GLRA2P23416 452 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 ZNF410Q86VK4 478 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 GRAMD1CQ8IYS0 662 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 DAW1Q8N136 415 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 ASAP3Q8TDY4 903 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 DNAJC19Q96DA6 116 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 TRIM9Q9C026 710 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 BLZF1Q9H2G9 400 aa22.14■■□□□ 1.13
CTSD-206ENST00000497544 LARSQ9P2J5 1176 aaKnown RBP22.14■■□□□ 1.13
CTSD-206ENST00000497544 UMODL1Q5DID0 1318 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 CHD7Q9P2D1 2997 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 A0A087WZ62 844 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 GPR32O75388 356 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 PARNO95453 639 aaKnown RBP22.13■■□□□ 1.13
CTSD-206ENST00000497544 MYL1P05976 194 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 MRE11P49959 708 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 CRYBB1P53674 252 aaPredicted RBP22.13■■□□□ 1.13
CTSD-206ENST00000497544 PEX3P56589 373 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 ASIC1P78348 528 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 MGAT3Q09327 533 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 MAPK7Q13164 816 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 CCDC65Q8IXS2 484 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 MYCT1Q8N699 235 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 RNF149Q8NC42 400 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 FDXACB1Q9BRP7 624 aaPredicted RBP22.13■■□□□ 1.13
CTSD-206ENST00000497544 GCOM2Q9BZD3 368 aaPredicted RBP22.13■■□□□ 1.13
CTSD-206ENST00000497544 ADAMTS10Q9H324 1103 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 CDHR5Q9HBB8 845 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 PARVGQ9HBI0 331 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 PANK4Q9NVE7 773 aa22.13■■□□□ 1.13
CTSD-206ENST00000497544 GBF1Q92538 1859 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 LRRIQ4A6NIV6 560 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 CCDC169A6NNP5 214 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 GTPBP6O43824 516 aaPredicted RBP22.12■■□□□ 1.13
CTSD-206ENST00000497544 PLS3P13797 630 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 PBX2P40425 430 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 NAMPTP43490 491 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 SMTNP53814 917 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 TFF2Q03403 129 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 POU5F1BQ06416 359 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 DMP1Q13316 513 aaPredicted RBP22.12■■□□□ 1.13
CTSD-206ENST00000497544 TMEM199Q8N511 208 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 BSNDQ8WZ55 320 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 SCLYQ96I15 445 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 OSMRQ99650 979 aa22.12■■□□□ 1.13
CTSD-206ENST00000497544 INO80BQ9C086 356 aaPredicted RBP22.12■■□□□ 1.13
CTSD-206ENST00000497544 GAP43P17677 238 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 PTMSP20962 102 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 IGFBP4P22692 258 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 KCNQ1P51787 676 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 CUL4BQ13620 913 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 CAPSQ13938 189 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 ODR4Q5SWX8 454 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 MFSD5Q6N075 450 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 CNNM4Q6P4Q7 775 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 SRGAP1Q7Z6B7 1085 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 DEPTORQ8TB45 409 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 WNT8AQ9H1J5 351 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 KMT5AQ9NQR1 393 aa22.11■■□□□ 1.13
CTSD-206ENST00000497544 FAM86C2PA6NEL3 165 aa22.1■■□□□ 1.13
CTSD-206ENST00000497544 CASP1P29466 404 aa22.1■■□□□ 1.13
CTSD-206ENST00000497544 PHKA2P46019 1235 aa22.1■■□□□ 1.13
CTSD-206ENST00000497544 PTENP60484 403 aa22.1■■□□□ 1.13
CTSD-206ENST00000497544 POSTNQ15063 836 aa22.1■■□□□ 1.13
CTSD-206ENST00000497544 HERC4Q5GLZ8 1057 aaPredicted RBP22.1■■□□□ 1.13
CTSD-206ENST00000497544 TRAF7Q6Q0C0 670 aa22.1■■□□□ 1.13
CTSD-206ENST00000497544 ELOA2Q8IYF1 753 aaPredicted RBP22.1■■□□□ 1.13
CTSD-206ENST00000497544 CCDC47Q96A33 483 aaKnown RBP22.1■■□□□ 1.13
CTSD-206ENST00000497544 PBX4Q9BYU1 374 aa22.1■■□□□ 1.13
CTSD-206ENST00000497544 SQORQ9Y6N5 450 aa22.1■■□□□ 1.13
CTSD-206ENST00000497544 PVALEFA0A1B0GWK0 134 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 TRAK2O60296 914 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 GPR37L1O60883 481 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 MBD3O95983 291 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 EIF4BP23588 611 aaKnown RBP22.09■■□□□ 1.13
CTSD-206ENST00000497544 NPTX2P47972 431 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 ZNF131P52739 623 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 FPGSQ05932 587 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 FBXO47Q5MNV8 452 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 UNC13DQ70J99 1090 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 ZBTB8OSQ8IWT0 167 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 SPIRE2Q8WWL2 714 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 C2orf40Q9H1Z8 148 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 IFT122Q9HBG6 1241 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 SEL1LQ9UBV2 794 aa22.09■■□□□ 1.13
CTSD-206ENST00000497544 GRXCR1A8MXD5 290 aa22.08■■□□□ 1.13
CTSD-206ENST00000497544 RPS6KA5O75582 802 aa22.08■■□□□ 1.13
CTSD-206ENST00000497544 PRR29P0C7W0 189 aa22.08■■□□□ 1.13
CTSD-206ENST00000497544 GHRP10912 638 aa22.08■■□□□ 1.13
CTSD-206ENST00000497544 DARSP14868 501 aaKnown RBP22.08■■□□□ 1.13
CTSD-206ENST00000497544 RFC2P35250 354 aa22.08■■□□□ 1.13
CTSD-206ENST00000497544 SFR1Q86XK3 245 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms