RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 POU3F2P20265 443 aaPredicted RBP5.17□□□□□ -1.58
CBX3-208ENST00000497498 SPIDRQ14159 915 aa5.17□□□□□ -1.58
CBX3-208ENST00000497498 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
CBX3-208ENST00000497498 NAIF1Q69YI7 327 aaPredicted RBP5.17□□□□□ -1.58
CBX3-208ENST00000497498 ELOA2Q8IYF1 753 aaPredicted RBP5.17□□□□□ -1.58
CBX3-208ENST00000497498 RTF1Q92541 710 aaKnown RBP5.17□□□□□ -1.58
CBX3-208ENST00000497498 POFUT1Q9H488 388 aa5.17□□□□□ -1.58
CBX3-208ENST00000497498 ZSWIM4Q9H7M6 989 aa5.17□□□□□ -1.58
CBX3-208ENST00000497498 TOMM22Q9NS69 142 aa5.17□□□□□ -1.58
CBX3-208ENST00000497498 TRPS1Q9UHF7 1281 aa5.17□□□□□ -1.58
CBX3-208ENST00000497498 FAM83GA6ND36 823 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 GRXCR1A8MXD5 290 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 GOLGA6L6A8MZA4 724 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 MFAP3LO75121 409 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 IPO13O94829 963 aaKnown RBP5.16□□□□□ -1.58
CBX3-208ENST00000497498 FSBPO95073 299 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 GAAP10253 952 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 NPEPPSP55786 919 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 LRRC32Q14392 662 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 RABL3Q5HYI8 236 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 ATXN2LQ8WWM7 1075 aaKnown RBP5.16□□□□□ -1.58
CBX3-208ENST00000497498 AGAP2Q99490 1192 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 NOL10Q9BSC4 688 aaKnown RBP5.16□□□□□ -1.58
CBX3-208ENST00000497498 ENKD1Q9H0I2 346 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 H2AFY2Q9P0M6 372 aaPredicted RBP5.16□□□□□ -1.58
CBX3-208ENST00000497498 ZKSCAN5Q9Y2L8 839 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 DMRT1Q9Y5R6 373 aa5.16□□□□□ -1.58
CBX3-208ENST00000497498 ELL2O00472 640 aaPredicted RBP5.15□□□□□ -1.59
CBX3-208ENST00000497498 APOL3O95236 402 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 PTGS2P35354 604 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 DSG1Q02413 1049 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 DCAF17Q5H9S7 520 aaPredicted RBP5.15□□□□□ -1.59
CBX3-208ENST00000497498 RHOUQ7L0Q8 258 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 APBB1IPQ7Z5R6 666 aaPredicted RBP5.15□□□□□ -1.59
CBX3-208ENST00000497498 MRGPREQ86SM8 312 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 RPUSD2Q8IZ73 545 aaKnown RBP5.15□□□□□ -1.59
CBX3-208ENST00000497498 EFHBQ8N7U6 833 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 SLC25A43Q8WUT9 341 aaPredicted RBP5.15□□□□□ -1.59
CBX3-208ENST00000497498 ST8SIA2Q92186 375 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 HAS1Q92839 578 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 LENG9Q96B70 501 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 ARL8AQ96BM9 186 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 HIST1H2AHQ96KK5 128 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 UIMC1Q96RL1 719 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 HIST1H2AJQ99878 128 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 MTFR1LQ9H019 292 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 IFT57Q9NWB7 429 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 NCDNQ9UBB6 729 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 MYPNQ86TC9 1320 aa5.15□□□□□ -1.59
CBX3-208ENST00000497498 FOXN1O15353 648 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 GAS7O60861 476 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 STC2O76061 302 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 CD40P25942 277 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 TCEA2Q15560 299 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 CCDC144BQ3MJ40 725 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 UNC5BQ8IZJ1 945 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 MB21D1Q8N884 522 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 NRDE2Q9H7Z3 1164 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 ING3Q9NXR8 418 aa5.14□□□□□ -1.59
CBX3-208ENST00000497498 USP36Q9P275 1121 aaKnown RBP5.14□□□□□ -1.59
CBX3-208ENST00000497498 TMEM191CA6NGB0 347 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 NRP1O14786 923 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 HOXA3O43365 443 aaPredicted RBP5.13□□□□□ -1.59
CBX3-208ENST00000497498 TGM5O43548 720 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 RAMP2O60895 175 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 FAM20BO75063 409 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 RPS6KA4O75676 772 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 GNAT2P19087 354 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 COL10A1Q03692 680 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 METTL24Q5JXM2 366 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 GPR158Q5T848 1215 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 ZNF575Q86XF7 245 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 NXPE1Q8N323 547 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 ZNF276Q8N554 614 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 PIK3C3Q8NEB9 887 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 CHTF18Q8WVB6 975 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 PGBD4Q96DM1 585 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 ZNF496Q96IT1 587 aaPredicted RBP5.13□□□□□ -1.59
CBX3-208ENST00000497498 RNPC3Q96LT9 517 aaKnown RBP5.13□□□□□ -1.59
CBX3-208ENST00000497498 PDCD2LQ9BRP1 358 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 TTPALQ9BTX7 342 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 PCDHB6Q9Y5E3 794 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 CD2APQ9Y5K6 639 aa5.13□□□□□ -1.59
CBX3-208ENST00000497498 ZNF891A8MT65 544 aaPredicted RBP5.12□□□□□ -1.59
CBX3-208ENST00000497498 KPNA6O60684 536 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 ALDH1A2O94788 518 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 SEC24DO94855 1032 aaPredicted RBP5.12□□□□□ -1.59
CBX3-208ENST00000497498 PCDH8O95206 1070 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 PFKMP08237 780 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 NR4A1P22736 598 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 NEK4P51957 841 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 NANOS3P60323 173 aaKnown RBP5.12□□□□□ -1.59
CBX3-208ENST00000497498 CD69Q07108 199 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 LAIR1Q6GTX8 287 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 ESPNLQ6ZVH7 1005 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 LRRTM3Q86VH5 581 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 HOMER1Q86YM7 354 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 PASD1Q8IV76 773 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 CDYL2Q8N8U2 506 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms