RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 PCDHB6Q9Y5E3 794 aa5.42□□□□□ -1.54
CMSS1-209ENST00000497345 PCDHA8Q9Y5H6 950 aa5.42□□□□□ -1.54
CMSS1-209ENST00000497345 PCDHA1Q9Y5I3 950 aa5.42□□□□□ -1.54
CMSS1-209ENST00000497345 SSC5DA1L4H1 1573 aa5.42□□□□□ -1.54
CMSS1-209ENST00000497345 GREB1LQ9C091 1923 aaPredicted RBP5.41□□□□□ -1.54
CMSS1-209ENST00000497345 MYH15Q9Y2K3 1946 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 TMEM265A0A087WTH1 108 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 SYCE3A1L190 88 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 ZBTB5O15062 677 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 SPTLC2O15270 562 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 FLOT1O75955 427 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 CEACAM5P06731 702 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 U2AF2P26368 475 aaKnown RBP eCLIP5.41□□□□□ -1.54
CMSS1-209ENST00000497345 CALML3P27482 149 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 GSTT1P30711 240 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 HOXA13P31271 388 aaPredicted RBP5.41□□□□□ -1.54
CMSS1-209ENST00000497345 STAT2P52630 851 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 UBE2HP62256 183 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 UBXN2AP68543 259 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 GRIN1Q05586 938 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 PLS1Q14651 629 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 ZRSR1Q15695 479 aaKnown RBP5.41□□□□□ -1.54
CMSS1-209ENST00000497345 LETM2Q2VYF4 491 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 USP17L6PQ6QN14 398 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 FAM214BQ7L5A3 538 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 ATG4DQ86TL0 474 aaPredicted RBP5.41□□□□□ -1.54
CMSS1-209ENST00000497345 TOP6BLQ8N6T0 577 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 CCDC148Q8NFR7 591 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 GRIN3AQ8TCU5 1115 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 CHURC1Q8WUH1 139 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 TBC1D5Q92609 795 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 CEP44Q9C0F1 390 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 FOXP1Q9H334 677 aaPredicted RBP5.41□□□□□ -1.54
CMSS1-209ENST00000497345 GOLPH3LQ9H4A5 285 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 PSTPIP2Q9H939 334 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 AS3MTQ9HBK9 375 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 RAVER2Q9HCJ3 691 aaKnown RBP5.41□□□□□ -1.54
CMSS1-209ENST00000497345 RTEL1Q9NZ71 1219 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 TMOD4Q9NZQ9 345 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 RCOR1Q9UKL0 485 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 PCDHA7Q9UN72 937 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 SAMM50Q9Y512 469 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 PPP2R3BQ9Y5P8 575 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 CSADQ9Y600 493 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 SNCAIPQ9Y6H5 919 aa5.41□□□□□ -1.54
CMSS1-209ENST00000497345 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 A0A1B0GVL5 298 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 ENC1O14682 589 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 MARCH6O60337 910 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 CCNT1O60563 726 aaKnown RBP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 ZBED4O75132 1171 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 MBD3O95983 291 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 CFBP00751 764 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 RNASE1P07998 156 aaKnown RBP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 ALAS1P13196 640 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 VCAM1P19320 739 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 SMARCA1P28370 1054 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 GNA11P29992 359 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 CD96P40200 585 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 RING1Q06587 406 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 GRM1Q13255 1194 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 NONOQ15233 471 aaKnown RBP eCLIP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 PTPAQ15257 358 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 NPY5RQ15761 445 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 ZSCAN23Q3MJ62 389 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 RILPL1Q5EBL4 403 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 PPM1JQ5JR12 505 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 CCDC73Q6ZRK6 1079 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 ARMC9Q7Z3E5 817 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 PNMA8AQ86V59 439 aaPredicted RBP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 C12orf40Q86WS4 652 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 CKAP2LQ8IYA6 745 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 REXO1Q8N1G1 1221 aaKnown RBP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 TMEM87AQ8NBN3 555 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 LINC00301Q8NCQ3 95 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 TBCKQ8TEA7 893 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 FBF1Q8TES7 1133 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 CCDC12Q8WUD4 166 aaPredicted RBP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 ERCC4Q92889 916 aaPredicted RBP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 CUL5Q93034 780 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 GJA10Q969M2 543 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 ATG4CQ96DT6 458 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 HRASLS5Q96KN8 279 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 HEXIM2Q96MH2 286 aaKnown RBP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 PLIN2Q99541 437 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 SLF1Q9BQI6 1058 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 AMNQ9BXJ7 453 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 OSBPL7Q9BZF2 842 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 SH3GLB2Q9NR46 395 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 MBNL3Q9NUK0 354 aaKnown RBP5.4□□□□□ -1.54
CMSS1-209ENST00000497345 DACT1Q9NYF0 836 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 ZNF112Q9UJU3 913 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 FEM1BQ9UK73 627 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 CCPG1Q9ULG6 757 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 SNX11Q9Y5W9 270 aa5.4□□□□□ -1.54
CMSS1-209ENST00000497345 PITPNM2Q9BZ72 1349 aa5.4□□□□□ -1.55
CMSS1-209ENST00000497345 DOCK1Q14185 1865 aa5.39□□□□□ -1.55
CMSS1-209ENST00000497345 A0A087WWV3 80 aa5.39□□□□□ -1.55
CMSS1-209ENST00000497345 VWA3AA6NCI4 1184 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms