RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 MAP2K6P52564 334 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 JAM2P57087 298 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 RAB1AP62820 205 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 MRPS9P82933 396 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 CTBSQ01459 385 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 DSC2Q02487 901 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 PTSQ03393 145 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 WASHC5Q12768 1159 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 DAG1Q14118 895 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 KIF22Q14807 665 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 STARD3Q14849 445 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 TAF5Q15542 800 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 DBN1Q16643 649 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.22□□□□□ -2.05
UBR4-217ENST00000497018 FAM110CQ1W6H9 321 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 DPY19L1Q2PZI1 675 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 UAP1L1Q3KQV9 507 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 C3orf36Q3SXR2 165 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 PITRM1Q5JRX3 1037 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 FBXO47Q5MNV8 452 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 ZBTB41Q5SVQ8 909 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 CCDC30Q5VVM6 783 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 MBNL2Q5VZF2 373 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 MSL1Q68DK7 614 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 PGBD2Q6P3X8 592 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 LMBR1LQ6UX01 489 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 TRIM67Q6ZTA4 783 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 FRMD7Q6ZUT3 714 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 TRIM46Q7Z4K8 759 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 TMC3Q7Z5M5 1100 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 SYT9Q86SS6 491 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 NLRP10Q86W26 655 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 LYSMD2Q8IV50 215 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 LIX1LQ8IVB5 337 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 SPNS2Q8IVW8 549 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 SYTL1Q8IYJ3 562 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 ZNF713Q8N859 430 aaPredicted RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 ZNF527Q8NB42 609 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 ANKRD52Q8NB46 1076 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 KLHL23Q8NBE8 558 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 RCBTB1Q8NDN9 531 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 APPL2Q8NEU8 664 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 IL31RAQ8NI17 732 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 KLHDC4Q8TBB5 520 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 SPPL3Q8TCT6 385 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 PANK1Q8TE04 598 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 SSH3Q8TE77 659 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 CREB3L4Q8TEY5 395 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 NANOS1Q8WY41 292 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 ANKS1AQ92625 1134 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 HTRA1Q92743 480 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 DLG3Q92796 817 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 ISL2Q96A47 359 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 ZNF837Q96EG3 531 aaPredicted RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 KLHDC7BQ96G42 594 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 MSLNLQ96KJ4 702 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 C16orf92Q96LL3 132 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 ZSCAN31Q96LW9 406 aaPredicted RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 ZFP42Q96MM3 310 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 FANCD2OSQ96PS1 177 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 GDF15Q99988 308 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 NUDT16L1Q9BRJ7 211 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 PDCD2LQ9BRP1 358 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 SORBS1Q9BX66 1292 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 UNKQ9C0B0 810 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 PDGFDQ9GZP0 370 aaPredicted RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 QRSL1Q9H0R6 528 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 SEMA4AQ9H3S1 761 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 ELAC1Q9H777 363 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 ZMAT3Q9HA38 289 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 PICK1Q9NRD5 415 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 HELLSQ9NRZ9 838 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 ATP8A2Q9NTI2 1148 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 GPATCH2Q9NW75 528 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 USP36Q9P275 1121 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 USP21Q9UK80 565 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 TMPRSS11EQ9UL52 423 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 RNF112Q9ULX5 631 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 MAGED1Q9Y5V3 778 aaPredicted RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 BACE2Q9Y5Z0 518 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 B3GALT1Q9Y5Z6 326 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 NUP188Q5SRE5 1749 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 AGLP35573 1532 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 CLTCQ00610 1675 aaKnown RBP2.22□□□□□ -2.05
UBR4-217ENST00000497018 RREB1Q92766 1687 aa2.22□□□□□ -2.05
UBR4-217ENST00000497018 ATP10BO94823 1461 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 FSD2A1L4K1 749 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 LGALS16A8MUM7 142 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 C19orf81C9J6K1 198 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 FAM47E-STBD1D6RA91 191 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 DDX3XO00571 662 aaKnown RBP eCLIP2.21□□□□□ -2.06
UBR4-217ENST00000497018 MAN2B1O00754 1011 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 C2CD2LO14523 706 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 FSCN2O14926 492 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 ARHGAP6O43182 974 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 IRAK2O43187 625 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 SIGLEC6O43699 453 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 TIPRLO75663 272 aa2.21□□□□□ -2.06
UBR4-217ENST00000497018 RGS9O75916 674 aaPredicted RBP2.21□□□□□ -2.06
UBR4-217ENST00000497018 KRT37O76014 449 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms