RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 ANKEF1Q9NU02 776 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 RNF216Q9NWF9 866 aaPredicted RBP21.75■■□□□ 1.07
COL20A1-208ENST00000496810 PCDHB12Q9Y5F1 795 aa21.75■■□□□ 1.07
COL20A1-208ENST00000496810 HOXA2O43364 376 aa21.74■■□□□ 1.07
COL20A1-208ENST00000496810 GAS2O43903 313 aaKnown RBP21.74■■□□□ 1.07
COL20A1-208ENST00000496810 B4GALT3O60512 393 aa21.74■■□□□ 1.07
COL20A1-208ENST00000496810 LAG3P18627 525 aa21.74■■□□□ 1.07
COL20A1-208ENST00000496810 ERVFC1P60507 584 aa21.74■■□□□ 1.07
COL20A1-208ENST00000496810 RBM10P98175 930 aaKnown RBP21.74■■□□□ 1.07
COL20A1-208ENST00000496810 GNL2Q13823 731 aaKnown RBP21.74■■□□□ 1.07
COL20A1-208ENST00000496810 UBXN11Q5T124 520 aa21.74■■□□□ 1.07
COL20A1-208ENST00000496810 PTCRAQ6ISU1 281 aaPredicted RBP21.74■■□□□ 1.07
COL20A1-208ENST00000496810 TCP11Q8WWU5 503 aa21.74■■□□□ 1.07
COL20A1-208ENST00000496810 KHSRPQ92945 711 aaKnown RBP eCLIP21.74■■□□□ 1.07
COL20A1-208ENST00000496810 TRAIPQ9BWF2 469 aa21.74■■□□□ 1.07
COL20A1-208ENST00000496810 INO80BQ9C086 356 aaPredicted RBP21.74■■□□□ 1.07
COL20A1-208ENST00000496810 PCDHB6Q9Y5E3 794 aa21.74■■□□□ 1.07
COL20A1-208ENST00000496810 GLP2RO95838 553 aa21.73■■□□□ 1.07
COL20A1-208ENST00000496810 EOMESO95936 686 aa21.73■■□□□ 1.07
COL20A1-208ENST00000496810 GLRA2P23416 452 aa21.73■■□□□ 1.07
COL20A1-208ENST00000496810 ARL2P36404 184 aa21.73■■□□□ 1.07
COL20A1-208ENST00000496810 ECM1Q16610 540 aa21.73■■□□□ 1.07
COL20A1-208ENST00000496810 KCNT2Q6UVM3 1135 aa21.73■■□□□ 1.07
COL20A1-208ENST00000496810 SRGAP1Q7Z6B7 1085 aa21.73■■□□□ 1.07
COL20A1-208ENST00000496810 RBM23Q86U06 439 aaKnown RBP21.73■■□□□ 1.07
COL20A1-208ENST00000496810 TMEM173Q86WV6 379 aaPredicted RBP21.73■■□□□ 1.07
COL20A1-208ENST00000496810 POLR3FQ9H1D9 316 aaPredicted RBP21.73■■□□□ 1.07
COL20A1-208ENST00000496810 TLR9Q9NR96 1032 aa21.73■■□□□ 1.07
COL20A1-208ENST00000496810 AAASQ9NRG9 546 aa21.73■■□□□ 1.07
COL20A1-208ENST00000496810 TDRD15B5MCY1 1934 aaKnown RBP21.72■■□□□ 1.07
COL20A1-208ENST00000496810 GRXCR2A6NFK2 248 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 TSPAN1O60635 241 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 DGAT1O75907 488 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 NRIP1P48552 1158 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 AFF1P51825 1210 aaKnown RBP21.72■■□□□ 1.07
COL20A1-208ENST00000496810 PTENP60484 403 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 ORC2Q13416 577 aaPredicted RBP21.72■■□□□ 1.07
COL20A1-208ENST00000496810 MAEAQ7L5Y9 396 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 EXOC8Q8IYI6 725 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 CCDC43Q96MW1 224 aaKnown RBP21.72■■□□□ 1.07
COL20A1-208ENST00000496810 ZNF558Q96NG5 402 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 UPF2Q9HAU5 1272 aaKnown RBP21.72■■□□□ 1.07
COL20A1-208ENST00000496810 TUFT1Q9NNX1 390 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 INPP5FQ9Y2H2 1132 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 PCDHB2Q9Y5E7 798 aa21.72■■□□□ 1.07
COL20A1-208ENST00000496810 NT5C1B-RDH14C9J2C7 533 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 FSCN2O14926 492 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 TRAPPC10P48553 1259 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 MBTD1Q05BQ5 628 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 AMHR2Q16671 573 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 PLPP4Q5VZY2 271 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 AGMOQ6ZNB7 445 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 VN1R2Q8NFZ6 395 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 CPB2Q96IY4 423 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 POLR3CQ9BUI4 534 aaPredicted RBP21.71■■□□□ 1.07
COL20A1-208ENST00000496810 TBC1D13Q9NVG8 400 aa21.71■■□□□ 1.07
COL20A1-208ENST00000496810 NOL7Q9UMY1 257 aaKnown RBP21.71■■□□□ 1.07
COL20A1-208ENST00000496810 PP2D1A8MPX8 630 aa21.7■■□□□ 1.06
COL20A1-208ENST00000496810 PER2O15055 1255 aa21.7■■□□□ 1.06
COL20A1-208ENST00000496810 B4GALT5O43286 388 aa21.7■■□□□ 1.06
COL20A1-208ENST00000496810 GJB2P29033 226 aa21.7■■□□□ 1.06
COL20A1-208ENST00000496810 UBE3AQ05086 875 aa21.7■■□□□ 1.06
COL20A1-208ENST00000496810 IL17AQ16552 155 aa21.7■■□□□ 1.06
COL20A1-208ENST00000496810 SLC39A11Q8N1S5 342 aa21.7■■□□□ 1.06
COL20A1-208ENST00000496810 BCL7CQ8WUZ0 217 aaPredicted RBP21.7■■□□□ 1.06
COL20A1-208ENST00000496810 BSNDQ8WZ55 320 aa21.7■■□□□ 1.06
COL20A1-208ENST00000496810 MRPS27Q92552 414 aaKnown RBP21.7■■□□□ 1.06
COL20A1-208ENST00000496810 EIF2AQ9BY44 585 aaKnown RBP21.7■■□□□ 1.06
COL20A1-208ENST00000496810 CLEC1BQ9P126 229 aa21.7■■□□□ 1.06
COL20A1-208ENST00000496810 HIDE1A8MVS5 230 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 INO80B-WBP1J3KQ70 363 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 ASAP2O43150 1006 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 ZNF623O75123 536 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 ZC3H11AO75152 810 aaKnown RBP eCLIP21.69■■□□□ 1.06
COL20A1-208ENST00000496810 OFD1O75665 1012 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 RPA1P27694 616 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 FXR2P51116 673 aaKnown RBP eCLIP21.69■■□□□ 1.06
COL20A1-208ENST00000496810 RAB27AP51159 221 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 BCAR1P56945 870 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 PLCB3Q01970 1234 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 PTGDRQ13258 359 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 ADAM15Q13444 863 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 MXD4Q14582 209 aaPredicted RBP21.69■■□□□ 1.06
COL20A1-208ENST00000496810 IFNLR1Q8IU57 520 aaPredicted RBP21.69■■□□□ 1.06
COL20A1-208ENST00000496810 FAM178BQ8IXR5 827 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 SMG8Q8ND04 991 aaKnown RBP21.69■■□□□ 1.06
COL20A1-208ENST00000496810 DNAJB4Q9UDY4 337 aa21.69■■□□□ 1.06
COL20A1-208ENST00000496810 DBR1Q9UK59 544 aaKnown RBP21.69■■□□□ 1.06
COL20A1-208ENST00000496810 BARX2Q9UMQ3 279 aaPredicted RBP21.69■■□□□ 1.06
COL20A1-208ENST00000496810 ERLIN2O94905 339 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 CSPP1Q1MSJ5 1256 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 NOMO2Q5JPE7 1267 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 MCTP1Q6DN14 999 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 GLB1LQ6UWU2 654 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 CDR2LQ86X02 465 aaPredicted RBP21.68■■□□□ 1.06
COL20A1-208ENST00000496810 EFHBQ8N7U6 833 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 MICAL1Q8TDZ2 1067 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 TCF25Q9BQ70 676 aa21.68■■□□□ 1.06
COL20A1-208ENST00000496810 MRPL9Q9BYD2 267 aaKnown RBP21.68■■□□□ 1.06
COL20A1-208ENST00000496810 NRDE2Q9H7Z3 1164 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms