RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SLC30A5Q8TAD4 765 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 OLIG1Q8TAK6 271 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 LMO3Q8TAP4 145 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 TAF4BQ92750 862 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 ATP6V0A1Q93050 837 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 KLRG1Q96E93 195 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 SGIP1Q9BQI5 828 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 ACAD9Q9H845 621 aa14.18□□□□□ -0.14
GARNL3-220ENST00000496711 RBM12Q9NTZ6 932 aaKnown RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 PACSIN2Q9UNF0 486 aaPredicted RBP14.18□□□□□ -0.14
GARNL3-220ENST00000496711 NCANO14594 1321 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 NFASCO94856 1347 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 MYPNQ86TC9 1320 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 KCNA2P16389 499 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 DMP1Q13316 513 aaPredicted RBP14.17□□□□□ -0.14
GARNL3-220ENST00000496711 GLE1Q53GS7 698 aaKnown RBP14.17□□□□□ -0.14
GARNL3-220ENST00000496711 CATSPERGQ6ZRH7 1159 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 ANO5Q75V66 913 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 OTUD6AQ7L8S5 288 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 TRMT1LQ7Z2T5 733 aaKnown RBP14.17□□□□□ -0.14
GARNL3-220ENST00000496711 CCDC125Q86Z20 511 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 GSPT2Q8IYD1 628 aaKnown RBP14.17□□□□□ -0.14
GARNL3-220ENST00000496711 VTI1AQ96AJ9 217 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 MS4A14Q96JA4 679 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 CDHR1Q96JP9 859 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 SYT11Q9BT88 431 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 GPRC5DQ9NZD1 345 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 GABBR1Q9UBS5 961 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 ZNFX1Q9P2E3 1918 aaKnown RBP14.17□□□□□ -0.14
GARNL3-220ENST00000496711 SBF1O95248 1867 aa14.17□□□□□ -0.14
GARNL3-220ENST00000496711 A0A0U1RQG5 324 aaPredicted RBP14.16□□□□□ -0.14
GARNL3-220ENST00000496711 STAM2O75886 525 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 KIF4AO95239 1232 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 MYBL2P10244 700 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 SMTNP53814 917 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 PPP3CAQ08209 521 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 KIF22Q14807 665 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 RPS6KA1Q15418 735 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 ARHGAP44Q17R89 818 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 EPC2Q52LR7 807 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 PHLDB3Q6NSJ2 640 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 DNAAF5Q86Y56 855 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 MAP4K3Q8IVH8 894 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 GLYCTKQ8IVS8 523 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 TPCN2Q8NHX9 752 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 AENQ8WTP8 325 aaKnown RBP14.16□□□□□ -0.14
GARNL3-220ENST00000496711 KIFAP3Q92845 792 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 SELENOOQ9BVL4 669 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 MAF1Q9H063 256 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 A1CFQ9NQ94 594 aaKnown RBP14.16□□□□□ -0.14
GARNL3-220ENST00000496711 CYP39A1Q9NYL5 469 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 STIM2Q9P246 746 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 DMGDHQ9UI17 866 aaKnown RBP14.16□□□□□ -0.14
GARNL3-220ENST00000496711 LRRC37A2A6NM11 1700 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 CCDC169A6NNP5 214 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 RGS20O76081 388 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 PSAPP07602 524 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 TNFRSF8P28908 595 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 NPTX2P47972 431 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 HSP90B2PQ58FF3 399 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 C1orf220Q5T0J3 134 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 SYCE1Q8N0S2 351 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 TMEM161BQ8NDZ6 487 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 HDAC7Q8WUI4 952 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 LMBR1Q8WVP7 490 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 ZMYND15Q9H091 742 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 C17orf75Q9HAS0 396 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 JPH1Q9HDC5 661 aaPredicted RBP14.16□□□□□ -0.14
GARNL3-220ENST00000496711 ZCCHC17Q9NP64 241 aaKnown RBP14.16□□□□□ -0.14
GARNL3-220ENST00000496711 MED4Q9NPJ6 270 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 HPCAL4Q9UM19 191 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 TBX20Q9UMR3 447 aa14.16□□□□□ -0.14
GARNL3-220ENST00000496711 SPDYE16A6NNV3 312 aaPredicted RBP14.15□□□□□ -0.14
GARNL3-220ENST00000496711 ADRB2P07550 413 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 TMEM253P0C7T8 217 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 GCLMP48507 274 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 MXI1P50539 228 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 GALCP54803 685 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 GNPTABQ3T906 1256 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 FAM71BQ8TC56 605 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 PLEKHO2Q8TD55 490 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 SPIRE2Q8WWL2 714 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 CCDC102AQ96A19 550 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 PBKQ96KB5 322 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 CEP170P1Q96L14 293 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 KMT5AQ9NQR1 393 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 SLC9A2Q9UBY0 812 aa14.15□□□□□ -0.14
GARNL3-220ENST00000496711 DENND3A2RUS2 1198 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 KCNK3O14649 394 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 PMM2O15305 246 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 ZNF862O60290 1169 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 LRRN2O75325 713 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 AARSP49588 968 aaKnown RBP eCLIP14.14□□□□□ -0.15
GARNL3-220ENST00000496711 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
GARNL3-220ENST00000496711 SLC7A5Q01650 507 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 R3HDM1Q15032 1099 aaKnown RBP14.14□□□□□ -0.15
GARNL3-220ENST00000496711 SLFN11Q7Z7L1 901 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 ARHGEF19Q8IW93 802 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 USP38Q8NB14 1042 aa14.14□□□□□ -0.15
GARNL3-220ENST00000496711 ZSWIM2Q8NEG5 633 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms