RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 FAM105AQ9NUU6 356 aa13.81□□□□□ -0.2
CLDN12-213ENST00000496677 CLEC1BQ9P126 229 aa13.81□□□□□ -0.2
CLDN12-213ENST00000496677 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 POTEMA6NI47 508 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 MEIS3P2A8K0S8 358 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 TBX10O75333 385 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 GLP2RO95838 553 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 ATP2B1P20020 1258 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 U2AF2P26368 475 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLDN12-213ENST00000496677 RARRES1P49788 294 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 PTENP60484 403 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 POU5F1BQ06416 359 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 RABEP1Q15276 862 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 ZNF174Q15697 407 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 SPOUT1Q5T280 376 aaKnown RBP13.8□□□□□ -0.2
CLDN12-213ENST00000496677 PDE12Q6L8Q7 609 aaKnown RBP13.8□□□□□ -0.2
CLDN12-213ENST00000496677 CATSPER4Q7RTX7 472 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 CATSPER3Q86XQ3 398 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 NOSTRINQ8IVI9 506 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 LRRC43Q8N309 656 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 RNF169Q8NCN4 708 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 MRPS27Q92552 414 aaKnown RBP13.8□□□□□ -0.2
CLDN12-213ENST00000496677 ZNF558Q96NG5 402 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 IGFLR1Q9H665 355 aa13.8□□□□□ -0.2
CLDN12-213ENST00000496677 BMP2KQ9NSY1 1161 aaPredicted RBP13.8□□□□□ -0.2
CLDN12-213ENST00000496677 PIN4Q9Y237 131 aaKnown RBP13.8□□□□□ -0.2
CLDN12-213ENST00000496677 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 MED24O75448 989 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 OFD1O75665 1012 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 DGAT1O75907 488 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 CSPG5O95196 566 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 EYA4O95677 639 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 SKIP12755 728 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 PBX3P40426 434 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 NRIP1P48552 1158 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 TRAPPC10P48553 1259 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 TOB1P50616 345 aaPredicted RBP13.79□□□□□ -0.2
CLDN12-213ENST00000496677 RAB27AP51159 221 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 KCNC3Q14003 757 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 MXD4Q14582 209 aaPredicted RBP13.79□□□□□ -0.2
CLDN12-213ENST00000496677 TWF2Q6IBS0 349 aaKnown RBP13.79□□□□□ -0.2
CLDN12-213ENST00000496677 AGMOQ6ZNB7 445 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 THNSL1Q8IYQ7 743 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 ABI1Q8IZP0 508 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 SLC39A11Q8N1S5 342 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 RNF149Q8NC42 400 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 VN1R2Q8NFZ6 395 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 ASAP3Q8TDY4 903 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 PIGOQ8TEQ8 1089 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 RSPH1Q8WYR4 309 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 LPPQ93052 612 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 MTRQ99707 1265 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 POLR3CQ9BUI4 534 aaPredicted RBP13.79□□□□□ -0.2
CLDN12-213ENST00000496677 EPHX3Q9H6B9 360 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 TUFT1Q9NNX1 390 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 TLR9Q9NR96 1032 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 SPG21Q9NZD8 308 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 PCDHB2Q9Y5E7 798 aa13.79□□□□□ -0.2
CLDN12-213ENST00000496677 MBTPS2O43462 519 aa13.78□□□□□ -0.2
CLDN12-213ENST00000496677 CD2BP2O95400 341 aaKnown RBP13.78□□□□□ -0.2
CLDN12-213ENST00000496677 OR52Z1P0C646 297 aa13.78□□□□□ -0.2
CLDN12-213ENST00000496677 SMAD2Q15796 467 aaKnown RBP13.78□□□□□ -0.2
CLDN12-213ENST00000496677 AMHR2Q16671 573 aa13.78□□□□□ -0.2
CLDN12-213ENST00000496677 TTC38Q5R3I4 469 aa13.78□□□□□ -0.2
CLDN12-213ENST00000496677 EP400NLQ6ZTU2 488 aa13.78□□□□□ -0.2
CLDN12-213ENST00000496677 MRPL9Q9BYD2 267 aaKnown RBP13.78□□□□□ -0.2
CLDN12-213ENST00000496677 TLE6Q9H808 572 aa13.78□□□□□ -0.2
CLDN12-213ENST00000496677 DBR1Q9UK59 544 aaKnown RBP13.78□□□□□ -0.2
CLDN12-213ENST00000496677 PER2O15055 1255 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 B4GALT3O60512 393 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 TSPAN1O60635 241 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 GLRA2P23416 452 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 RPA1P27694 616 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 PPM1AP35813 382 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 TECP42680 631 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLDN12-213ENST00000496677 AFF1P51825 1210 aaKnown RBP13.77□□□□□ -0.21
CLDN12-213ENST00000496677 BCAR1P56945 870 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 ZP2Q05996 745 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 MBTD1Q05BQ5 628 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 COASYQ13057 564 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 CAPSQ13938 189 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 NBR1Q14596 966 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 PCBP1Q15365 356 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLDN12-213ENST00000496677 DUSP6Q16828 381 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 LONRF3Q496Y0 759 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 NOMO2Q5JPE7 1267 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 TMEM184AQ6ZMB5 413 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 RBM23Q86U06 439 aaKnown RBP13.77□□□□□ -0.21
CLDN12-213ENST00000496677 GJD3Q8N144 294 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 FAM184AQ8NB25 1140 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 SMG8Q8ND04 991 aaKnown RBP13.77□□□□□ -0.21
CLDN12-213ENST00000496677 MICAL1Q8TDZ2 1067 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 PPP2R3CQ969Q6 453 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 NACC1Q96RE7 527 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 NFKBIZQ9BYH8 718 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 TBC1D13Q9NVG8 400 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 PRKAG3Q9UGI9 489 aa13.77□□□□□ -0.21
CLDN12-213ENST00000496677 PUF60Q9UHX1 559 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms