RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 INO80BQ9C086 356 aaPredicted RBP20.23■□□□□ 0.83
TSSC4-210ENST00000496468 MRPL44Q9H9J2 332 aaKnown RBP20.23■□□□□ 0.83
TSSC4-210ENST00000496468 CDHR5Q9HBB8 845 aa20.23■□□□□ 0.83
TSSC4-210ENST00000496468 RMND1Q9NWS8 449 aa20.23■□□□□ 0.83
TSSC4-210ENST00000496468 TBC1D7Q9P0N9 293 aa20.23■□□□□ 0.83
TSSC4-210ENST00000496468 ARHGAP28Q9P2N2 729 aa20.23■□□□□ 0.83
TSSC4-210ENST00000496468 NR2E3Q9Y5X4 410 aa20.23■□□□□ 0.83
TSSC4-210ENST00000496468 INO80B-WBP1J3KQ70 363 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 SYN1P17600 705 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 EIF4BP23588 611 aaKnown RBP20.22■□□□□ 0.83
TSSC4-210ENST00000496468 ITGB8P26012 769 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 RFC2P35250 354 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 EFNA5P52803 228 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 MBTD1Q05BQ5 628 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 PAK2Q13177 524 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 MBTPS1Q14703 1052 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 KLHL40Q2TBA0 621 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 TMEM199Q8N511 208 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 USP38Q8NB14 1042 aa20.22■□□□□ 0.83
TSSC4-210ENST00000496468 SYAP1Q96A49 352 aaPredicted RBP20.22■□□□□ 0.83
TSSC4-210ENST00000496468 DENND3A2RUS2 1198 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 RPS6KA5O75582 802 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 ERLIN2O94905 339 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 GCNT3O95395 438 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 MAPTP10636 758 aaKnown RBP20.21■□□□□ 0.83
TSSC4-210ENST00000496468 SCP2P22307 547 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 ABCD1P33897 745 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 EHHADHQ08426 723 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 LPIN1Q14693 890 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 KCNB1Q14721 858 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 CCDC183Q5T5S1 534 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 MFSD5Q6N075 450 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 FAM228AQ86W67 206 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 TMEM161BQ8NDZ6 487 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 GSDMAQ96QA5 445 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 FIZ1Q96SL8 496 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 MINDY3Q9H8M7 445 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 PCDHA5Q9Y5H7 936 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 SQORQ9Y6N5 450 aa20.21■□□□□ 0.83
TSSC4-210ENST00000496468 NBNO60934 754 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 CSDE1O75534 798 aaKnown RBP20.2■□□□□ 0.82
TSSC4-210ENST00000496468 RHOBTB3O94955 611 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 PRKCBP05771 671 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 NMT1P30419 496 aaKnown RBP20.2■□□□□ 0.82
TSSC4-210ENST00000496468 RGS19P49795 217 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 ALCAMQ13740 583 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 MAPK6Q16659 721 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 CAVIN1Q6NZI2 390 aaKnown RBP20.2■□□□□ 0.82
TSSC4-210ENST00000496468 STXBP4Q6ZWJ1 553 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 CATSPER4Q7RTX7 472 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 HAUS6Q7Z4H7 955 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 SPATA20Q8TB22 786 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 HPS3Q969F9 1004 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 NTPCRQ9BSD7 190 aaKnown RBP20.2■□□□□ 0.82
TSSC4-210ENST00000496468 IFIH1Q9BYX4 1025 aaKnown RBP20.2■□□□□ 0.82
TSSC4-210ENST00000496468 CCDC113Q9H0I3 377 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 PRMT7Q9NVM4 692 aaPredicted RBP20.2■□□□□ 0.82
TSSC4-210ENST00000496468 PCDH10Q9P2E7 1040 aa20.2■□□□□ 0.82
TSSC4-210ENST00000496468 NOC2LQ9Y3T9 749 aaKnown RBP20.2■□□□□ 0.82
TSSC4-210ENST00000496468 MYBP10242 640 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 FGFR4P22455 802 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 CD52P31358 61 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 STRN3Q13033 797 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 PCBP1Q15365 356 aaKnown RBP eCLIP20.19■□□□□ 0.82
TSSC4-210ENST00000496468 SKOR2Q2VWA4 1001 aaPredicted RBP20.19■□□□□ 0.82
TSSC4-210ENST00000496468 DEFB128Q7Z7B8 93 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 BADQ92934 168 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 HVCN1Q96D96 273 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 LBHD1Q9BQE6 289 aaPredicted RBP20.19■□□□□ 0.82
TSSC4-210ENST00000496468 FGFBP2Q9BYJ0 223 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 ST6GALNAC4Q9H4F1 302 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
TSSC4-210ENST00000496468 K7ERI5 159 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 GPR182O15218 404 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 CXCL10P02778 98 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 CSF2RAP15509 400 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 CASP5P51878 434 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 FPGSQ05932 587 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 PSMD2Q13200 908 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 PPIGQ13427 754 aaKnown RBP eCLIP20.18■□□□□ 0.82
TSSC4-210ENST00000496468 NT5DC1Q5TFE4 455 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 PPP4R3CPQ6ZMV5 832 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 SEPT8Q92599 483 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 KCNN1Q92952 543 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 PRIMPOLQ96LW4 560 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 OSBPL7Q9BZF2 842 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 AGO3Q9H9G7 860 aaKnown RBP20.18■□□□□ 0.82
TSSC4-210ENST00000496468 ERVK-5Q9HDB9 667 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 SLC39A2Q9NP94 309 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 TMEM63CQ9P1W3 806 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 KIAA1468Q9P260 1216 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 MAN1B1Q9UKM7 699 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 PADI3Q9ULW8 664 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 UBE4BO95155 1302 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 CNTNAP2Q9UHC6 1331 aa20.18■□□□□ 0.82
TSSC4-210ENST00000496468 EIF3DO15371 548 aaKnown RBP eCLIP20.17■□□□□ 0.82
TSSC4-210ENST00000496468 TSPAN1O60635 241 aa20.17■□□□□ 0.82
TSSC4-210ENST00000496468 PPP1R37O75864 691 aa20.17■□□□□ 0.82
TSSC4-210ENST00000496468 PFKMP08237 780 aa20.17■□□□□ 0.82
TSSC4-210ENST00000496468 GTF2BQ00403 316 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms