RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 RBM10P98175 930 aaKnown RBP15.94■□□□□ 0.14
VTI1A-209ENST00000496445 XKR9Q5GH70 373 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 PLPP4Q5VZY2 271 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 FERMT3Q86UX7 667 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 TPH2Q8IWU9 490 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 EXOC8Q8IYI6 725 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 ZNF558Q96NG5 402 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 LLPHQ9BRT6 129 aaKnown RBP15.94■□□□□ 0.14
VTI1A-209ENST00000496445 C1QTNF1Q9BXJ1 281 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 INO80BQ9C086 356 aaPredicted RBP15.94■□□□□ 0.14
VTI1A-209ENST00000496445 FAM105AQ9NUU6 356 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 RAPGEFL1Q9UHV5 662 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 CD207Q9UJ71 328 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 BARX2Q9UMQ3 279 aaPredicted RBP15.94■□□□□ 0.14
VTI1A-209ENST00000496445 PCDHA12Q9UN75 941 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 LZTS1Q9Y250 596 aa15.94■□□□□ 0.14
VTI1A-209ENST00000496445 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 PER2O15055 1255 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 GAS2O43903 313 aaKnown RBP15.93■□□□□ 0.14
VTI1A-209ENST00000496445 SRGAP2CP0DJJ0 459 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 COL9A1P20849 921 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 SSTR3P32745 418 aaPredicted RBP15.93■□□□□ 0.14
VTI1A-209ENST00000496445 TXKP42681 527 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 DUSP6Q16828 381 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 LONRF3Q496Y0 759 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 OTUD6AQ7L8S5 288 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 ADHFE1Q8IWW8 467 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 SLC39A11Q8N1S5 342 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 C8orf76Q96K31 380 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 MTRQ99707 1265 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 MRPL9Q9BYD2 267 aaKnown RBP15.93■□□□□ 0.14
VTI1A-209ENST00000496445 PRKAG3Q9UGI9 489 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 FAM50BQ9Y247 325 aa15.93■□□□□ 0.14
VTI1A-209ENST00000496445 HIDE1A8MVS5 230 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 PI4K2BG5E9Z4 385 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 ZNF623O75123 536 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 EYA4O95677 639 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 ATP2B1P20020 1258 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 HOXA11P31270 313 aaPredicted RBP15.92■□□□□ 0.14
VTI1A-209ENST00000496445 MCM7P33993 719 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 PPM1AP35813 382 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 RAB27AP51159 221 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 COASYQ13057 564 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 UBXN11Q5T124 520 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 SRGAP1Q7Z6B7 1085 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 TMEM173Q86WV6 379 aaPredicted RBP15.92■□□□□ 0.14
VTI1A-209ENST00000496445 RNF149Q8NC42 400 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 SMRP1Q8NCR6 262 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 ASAP3Q8TDY4 903 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 MICAL1Q8TDZ2 1067 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 TCP11Q8WWU5 503 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 TCF25Q9BQ70 676 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 TLE6Q9H808 572 aa15.92■□□□□ 0.14
VTI1A-209ENST00000496445 NT5C1B-RDH14C9J2C7 533 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 B4GALT3O60512 393 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 SPATA31C1P0DKV0 1188 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 SKIP12755 728 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 RARRES1P49788 294 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 BCAR1P56945 870 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 KCNC3Q14003 757 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 SAFBQ15424 915 aaKnown RBP eCLIP15.91■□□□□ 0.14
VTI1A-209ENST00000496445 PDE12Q6L8Q7 609 aaKnown RBP15.91■□□□□ 0.14
VTI1A-209ENST00000496445 ZSCAN31Q96LW9 406 aaPredicted RBP15.91■□□□□ 0.14
VTI1A-209ENST00000496445 CDCA3Q99618 268 aaPredicted RBP15.91■□□□□ 0.14
VTI1A-209ENST00000496445 ENTPD7Q9NQZ7 604 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 ANKEF1Q9NU02 776 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 TBC1D13Q9NVG8 400 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 SPG21Q9NZD8 308 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 PCDHB2Q9Y5E7 798 aa15.91■□□□□ 0.14
VTI1A-209ENST00000496445 TDRD15B5MCY1 1934 aaKnown RBP15.91■□□□□ 0.14
VTI1A-209ENST00000496445 A0A087WWV3 80 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 FAM86C2PA6NEL3 165 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 ASAP2O43150 1006 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 ZC3H11AO75152 810 aaKnown RBP eCLIP15.9■□□□□ 0.14
VTI1A-209ENST00000496445 MED24O75448 989 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 OFD1O75665 1012 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 DGAT1O75907 488 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 RBM25P49756 843 aaKnown RBP15.9■□□□□ 0.14
VTI1A-209ENST00000496445 HMGN5P82970 282 aaKnown RBP15.9■□□□□ 0.14
VTI1A-209ENST00000496445 CAPSQ13938 189 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 AGMOQ6ZNB7 445 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 MRPL10Q7Z7H8 261 aaKnown RBP15.9■□□□□ 0.14
VTI1A-209ENST00000496445 FBXO18Q8NFZ0 1043 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 PIGOQ8TEQ8 1089 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 BCL7CQ8WUZ0 217 aaPredicted RBP15.9■□□□□ 0.14
VTI1A-209ENST00000496445 RSPH1Q8WYR4 309 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 LRFN3Q9BTN0 628 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 FOXP1Q9H334 677 aaPredicted RBP15.9■□□□□ 0.14
VTI1A-209ENST00000496445 NGRNQ9NPE2 291 aaKnown RBP15.9■□□□□ 0.14
VTI1A-209ENST00000496445 SH2B1Q9NRF2 756 aaPredicted RBP15.9■□□□□ 0.14
VTI1A-209ENST00000496445 INPP5FQ9Y2H2 1132 aa15.9■□□□□ 0.14
VTI1A-209ENST00000496445 WDFY4Q6ZS81 3184 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 TSPAN1O60635 241 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 GLRA2P23416 452 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 ARL2P36404 184 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 AFF1P51825 1210 aaKnown RBP15.89■□□□□ 0.13
VTI1A-209ENST00000496445 PTENP60484 403 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 MBTD1Q05BQ5 628 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 ZNF174Q15697 407 aa15.89■□□□□ 0.13
VTI1A-209ENST00000496445 AMHR2Q16671 573 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms