RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CEP104O60308 925 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 DKC1O60832 514 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■■■ 49.8
CMSS1-208ENST00000496116 EGFRP00533 1210 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 CCND2P30279 289 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 PEX3P56589 373 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 BACE1P56817 501 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 RNASE9P60153 205 aaKnown RBP12.01□□□□□ -0.49
CMSS1-208ENST00000496116 GUCY2DQ02846 1103 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 KIF22Q14807 665 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 XKR9Q5GH70 373 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 ALS2CLQ60I27 953 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 PHLDB3Q6NSJ2 640 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 SCYL3Q8IZE3 742 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 LMO3Q8TAP4 145 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 CBWD1Q9BRT8 395 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 EPB41L5Q9HCM4 733 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 RNF146Q9NTX7 359 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 TMEM59LQ9UK28 342 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 AMFRQ9UKV5 643 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 NCANO14594 1321 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 OPA1O60313 960 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 HSF2BPO75031 334 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 ATP9AO75110 1047 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 CLSTN1O94985 981 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 GLI1P08151 1106 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 CAPN2P17655 700 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 OAZ1P54368 228 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 DMP1Q13316 513 aaPredicted RBP12.01□□□□□ -0.49
CMSS1-208ENST00000496116 UGCGQ16739 394 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 FAM102BQ5T8I3 360 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 ZNF746Q6NUN9 644 aaPredicted RBP12.01□□□□□ -0.49
CMSS1-208ENST00000496116 OTUD6AQ7L8S5 288 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 DNAAF5Q86Y56 855 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■■■ 64.2
CMSS1-208ENST00000496116 GPRASP2Q96D09 838 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 HVCN1Q96D96 273 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.49
CMSS1-208ENST00000496116 SYT11Q9BT88 431 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 PICK1Q9NRD5 415 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 SEPT11Q9NVA2 429 aaKnown RBP12.01□□□□□ -0.49
CMSS1-208ENST00000496116 PCDHA10Q9Y5I2 948 aa12.01□□□□□ -0.49
CMSS1-208ENST00000496116 PARP14Q460N5 1801 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 ANKRD62A6NC57 917 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 CCDC188H7C350 402 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 AGPSO00116 658 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 PMM2O15305 246 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 SLC16A4O15374 487 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 LRRN2O75325 713 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 MXI1P50539 228 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 DLG4P78352 724 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 NT5DC3Q86UY8 548 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 ZNF280CQ8ND82 737 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 SLC35G2Q8TBE7 412 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 ATG4CQ96DT6 458 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 SENP7Q9BQF6 1050 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 SH2D3AQ9BRG2 576 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 MOV10L1Q9BXT6 1211 aaKnown RBP12□□□□□ -0.49
CMSS1-208ENST00000496116 GOLPH3Q9H4A6 298 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 C17orf75Q9HAS0 396 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 UBE2TQ9NPD8 197 aaPredicted RBP12□□□□□ -0.49
CMSS1-208ENST00000496116 CNOT7Q9UIV1 285 aaKnown RBP12□□□□□ -0.49
CMSS1-208ENST00000496116 STXBP5LQ9Y2K9 1186 aa12□□□□□ -0.49
CMSS1-208ENST00000496116 DIS3Q9Y2L1 958 aaKnown RBP12□□□□□ -0.49
CMSS1-208ENST00000496116 GOLGA8KD6RF30 607 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 NFKBIEO00221 500 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 FOXN3O00409 490 aaPredicted RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 CCNE2O96020 404 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 ACTN2P35609 894 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 GCLMP48507 274 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 GMPSP49915 693 aaPredicted RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 PPP3CAQ08209 521 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 PPFIA1Q13136 1202 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 BAATQ14032 418 aaPredicted RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 TBC1D10BQ4KMP7 808 aaPredicted RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 EPC2Q52LR7 807 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 NBPF12Q5TAG4 269 aaPredicted RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 TRMT1LQ7Z2T5 733 aaKnown RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 VSIG10LQ86VR7 867 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 KLHL7Q8IXQ5 586 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 RASGEF1CQ8N431 466 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 METTL13Q8N6R0 699 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 EIF1ADQ8N9N8 165 aaKnown RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 WHAMMQ8TF30 809 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 SCFD2Q8WU76 684 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 IFT81Q8WYA0 676 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 KIFAP3Q92845 792 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 ATP6V0A1Q93050 837 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 HES6Q96HZ4 224 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 AGPAT1Q99943 283 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 GPRC5CQ9NQ84 441 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 CWC15Q9P013 229 aaKnown RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 NFU1Q9UMS0 254 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 NOC2LQ9Y3T9 749 aaKnown RBP11.99□□□□□ -0.49
CMSS1-208ENST00000496116 GOLGA6CA6NDK9 693 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 CCDC169A6NNP5 214 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 TISP43B9A030 160 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 RAD51CO43502 376 aa11.99□□□□□ -0.49
CMSS1-208ENST00000496116 NR3C2P08235 984 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms