RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	CCDC169	A6NNP5	214 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	SLC26A4	O43511	780 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	CUTA	O60888	179 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	PPP6R2	O75170	966 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	KRT18	P05783	430 aa	Known RBP	10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	SLC12A3	P55017	1021 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	PEX3	P56589	373 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	HTRA4	P83105	476 aa	Predicted RBP	10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	TAP1	Q03518	808 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	MBTD1	Q05BQ5	628 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	TMEM132A	Q24JP5	1023 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	RRAGB	Q5VZM2	374 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	ZBTB8OS	Q8IWT0	167 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	SYT2	Q8N9I0	419 aa	Predicted RBP	10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	RAD54L	Q92698	747 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	KIFAP3	Q92845	792 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	CPB2	Q96IY4	423 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	KIFC3	Q9BVG8	833 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	PRDM12	Q9H4Q4	367 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	BLOC1S4	Q9NUP1	217 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	MTMR10	Q9NXD2	777 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	DACT1	Q9NYF0	836 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	CCDC39	Q9UFE4	941 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	USP20	Q9Y2K6	914 aa		10.87	□□□□□ -0.67
CALD1-223	ENST00000496024	TMEM265	A0A087WTH1	108 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	LINC01553	A4QN01	128 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	TBKBP1	A7MCY6	615 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	RFXAP	O00287	272 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	B4GALT5	O43286	388 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	FGFR1	P11362	822 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	ANP32A	P39687	249 aa	Known RBP	10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	STAT6	P42226	847 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	NAMPT	P43490	491 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	POU5F1B	Q06416	359 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	NCBP1	Q09161	790 aa	Known RBP	10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	BTG3	Q14201	252 aa	Predicted RBP	10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	PPP2R5A	Q15172	486 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	ARSH	Q5FYA8	562 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	ATL3	Q6DD88	541 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	CDR2L	Q86X02	465 aa	Predicted RBP	10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	ECHDC2	Q86YB7	292 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	DAW1	Q8N136	415 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	FIBCD1	Q8N539	461 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	KCTD17	Q8N5Z5	321 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	KCNG4	Q8TDN1	519 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	MYLIP	Q8WY64	445 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	LARP4B	Q92615	738 aa	Known RBP	10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	SPATA32	Q96LK8	384 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	GUCD1	Q96NT3	240 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	CDX2	Q99626	313 aa	Predicted RBP	10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	ZHX3	Q9H4I2	956 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	CHST12	Q9NRB3	414 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	AGPAT5	Q9NUQ2	364 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	PCDHA7	Q9UN72	937 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	ATP6V1D	Q9Y5K8	247 aa		10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.86	□□□□□ -0.67
CALD1-223	ENST00000496024	ADGRA3	Q8IWK6	1321 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.85	□□□□□ -0.67
CALD1-223	ENST00000496024		A0A087X0B3	334 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	EPOP	A6NHQ4	379 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	TSPAN1	O60635	241 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	DGKI	O75912	1065 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	PRKCB	P05771	671 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	GUCY2C	P25092	1073 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	HOXA11	P31270	313 aa	Predicted RBP	10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	DDIT3	P35638	169 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	NPTX2	P47972	431 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	KRT85	P78386	507 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	FAM189B	P81408	668 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	MAPK7	Q13164	816 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	DMP1	Q13316	513 aa	Predicted RBP	10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	AMHR2	Q16671	573 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	SHC4	Q6S5L8	630 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	CCDC73	Q6ZRK6	1079 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	DYM	Q7RTS9	669 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	HELQ	Q8TDG4	1101 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	LEO1	Q8WVC0	666 aa	Predicted RBP	10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	LPP	Q93052	612 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	DRC1	Q96MC2	740 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	TGS1	Q96RS0	853 aa	Known RBP	10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	C17orf80	Q9BSJ5	609 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	C2orf40	Q9H1Z8	148 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	GDPD2	Q9HCC8	539 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	PRMT7	Q9NVM4	692 aa	Predicted RBP	10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	TMEM161A	Q9NX61	479 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	RCOR1	Q9UKL0	485 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	MYO7A	Q13402	2215 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024	NLRC5	Q86WI3	1866 aa		10.85	□□□□□ -0.67
CALD1-223	ENST00000496024		A0A0U1RQF3	1178 aa		10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	TTLL13P	A6NNM8	815 aa		10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	SLC16A4	O15374	487 aa		10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	FAM13A	O94988	1023 aa		10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	FOSL2	P15408	326 aa		10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	ATF7	P17544	494 aa	Predicted RBP	10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	ARF4	P18085	180 aa	Predicted RBP	10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	IGFBP4	P22692	258 aa		10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	NUCB2	P80303	420 aa		10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	MAPK6	Q16659	721 aa		10.84	□□□□□ -0.67
CALD1-223	ENST00000496024	UBXN11	Q5T124	520 aa		10.84	□□□□□ -0.67

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