RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 ERVK-21P61565 698 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 ECHDC2Q86YB7 292 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 ZBTB8OSQ8IWT0 167 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 KCNG4Q8TDN1 519 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 LRRC15Q8TF66 581 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 DRC1Q96MC2 740 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 SAMD11Q96NU1 681 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 CLIC6Q96NY7 704 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 TGS1Q96RS0 853 aaKnown RBP22.18■■□□□ 1.14
COL9A2-210ENST00000495948 C2orf40Q9H1Z8 148 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 BLOC1S4Q9NUP1 217 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 PCDHB7Q9Y5E2 793 aa22.18■■□□□ 1.14
COL9A2-210ENST00000495948 TSPAN1O60635 241 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 HIP1RO75146 1068 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 RAB27AP51159 221 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 AMHR2Q16671 573 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 SPECC1Q5M775 1068 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 TWF2Q6IBS0 349 aaKnown RBP22.17■■□□□ 1.14
COL9A2-210ENST00000495948 PPP4R3CPQ6ZMV5 832 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 DAW1Q8N136 415 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 CCDC51Q96ER9 411 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 EPSTI1Q96J88 318 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 IFT74Q96LB3 600 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 PRIMPOLQ96LW4 560 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 C17orf75Q9HAS0 396 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 ZDHHC9Q9Y397 364 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 NLRC5Q86WI3 1866 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 CHD7Q9P2D1 2997 aa22.17■■□□□ 1.14
COL9A2-210ENST00000495948 HOXA2O43364 376 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 SSBP05455 408 aaKnown RBP eCLIP22.16■■□□□ 1.14
COL9A2-210ENST00000495948 SKIP12755 728 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 MAPK7Q13164 816 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 USP49Q70CQ1 688 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 SPRED2Q7Z698 418 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 FIBCD1Q8N539 461 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 MYLIPQ8WY64 445 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 LARP4BQ92615 738 aaKnown RBP22.16■■□□□ 1.14
COL9A2-210ENST00000495948 RAD54LQ92698 747 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 PRDM12Q9H4Q4 367 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 PRMT7Q9NVM4 692 aaPredicted RBP22.16■■□□□ 1.14
COL9A2-210ENST00000495948 TFIP11Q9UBB9 837 aaKnown RBP22.16■■□□□ 1.14
COL9A2-210ENST00000495948 STK17AQ9UEE5 414 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 CCDC39Q9UFE4 941 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 CFAP45Q9UL16 551 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 STXBP5LQ9Y2K9 1186 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 RWDD3Q9Y3V2 267 aa22.16■■□□□ 1.14
COL9A2-210ENST00000495948 FNDC1Q4ZHG4 1894 aaPredicted RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 ATF7P17544 494 aaPredicted RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 HOXA11P31270 313 aaPredicted RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 DNM1Q05193 864 aaKnown RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 DMP1Q13316 513 aaPredicted RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 BTG3Q14201 252 aaPredicted RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 FAM187BQ17R55 369 aa22.15■■□□□ 1.14
COL9A2-210ENST00000495948 FOXD4L6Q3SYB3 417 aaPredicted RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 NOTUMQ6P988 496 aa22.15■■□□□ 1.14
COL9A2-210ENST00000495948 FOXD4L3Q6VB84 417 aaPredicted RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 ZNF598Q86UK7 904 aaKnown RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 DEPTORQ8TB45 409 aa22.15■■□□□ 1.14
COL9A2-210ENST00000495948 ARNTL2Q8WYA1 636 aa22.15■■□□□ 1.14
COL9A2-210ENST00000495948 RSPH1Q8WYR4 309 aa22.15■■□□□ 1.14
COL9A2-210ENST00000495948 GAS2L1Q99501 681 aaPredicted RBP22.15■■□□□ 1.14
COL9A2-210ENST00000495948 FAM105AQ9NUU6 356 aa22.15■■□□□ 1.14
COL9A2-210ENST00000495948 ATP6V1DQ9Y5K8 247 aa22.15■■□□□ 1.14
COL9A2-210ENST00000495948 PHLPP2Q6ZVD8 1323 aa22.14■■□□□ 1.14
COL9A2-210ENST00000495948 CNTNAP2Q9UHC6 1331 aa22.14■■□□□ 1.14
COL9A2-210ENST00000495948 EPOPA6NHQ4 379 aa22.14■■□□□ 1.13
COL9A2-210ENST00000495948 CUTAO60888 179 aa22.14■■□□□ 1.13
COL9A2-210ENST00000495948 EOMESO95936 686 aa22.14■■□□□ 1.13
COL9A2-210ENST00000495948 LINC00271P0C7V0 271 aa22.14■■□□□ 1.13
COL9A2-210ENST00000495948 FOSL2P15408 326 aa22.14■■□□□ 1.13
COL9A2-210ENST00000495948 IBSPP21815 317 aaPredicted RBP22.14■■□□□ 1.13
COL9A2-210ENST00000495948 NCBP1Q09161 790 aaKnown RBP22.14■■□□□ 1.13
COL9A2-210ENST00000495948 CLP1Q92989 425 aaKnown RBP22.14■■□□□ 1.13
COL9A2-210ENST00000495948 CCDC113Q9H0I3 377 aa22.14■■□□□ 1.13
COL9A2-210ENST00000495948 RNF19AQ9NV58 838 aa22.14■■□□□ 1.13
COL9A2-210ENST00000495948 ODF2LQ9ULJ1 636 aa22.14■■□□□ 1.13
COL9A2-210ENST00000495948 KIAA1671Q9BY89 1806 aa22.14■■□□□ 1.13
COL9A2-210ENST00000495948 ZNF623O75123 536 aa22.13■■□□□ 1.13
COL9A2-210ENST00000495948 FGFR1P11362 822 aa22.13■■□□□ 1.13
COL9A2-210ENST00000495948 ARF4P18085 180 aaPredicted RBP22.13■■□□□ 1.13
COL9A2-210ENST00000495948 GATMP50440 423 aa22.13■■□□□ 1.13
COL9A2-210ENST00000495948 EFNA5P52803 228 aa22.13■■□□□ 1.13
COL9A2-210ENST00000495948 GPBP1Q86WP2 473 aa22.13■■□□□ 1.13
COL9A2-210ENST00000495948 C17orf80Q9BSJ5 609 aa22.13■■□□□ 1.13
COL9A2-210ENST00000495948 TMEM117Q9H0C3 514 aa22.13■■□□□ 1.13
COL9A2-210ENST00000495948 FZD8Q9H461 694 aa22.13■■□□□ 1.13
COL9A2-210ENST00000495948 CERS4Q9HA82 394 aa22.13■■□□□ 1.13
COL9A2-210ENST00000495948 DAXXQ9UER7 740 aaPredicted RBP22.13■■□□□ 1.13
COL9A2-210ENST00000495948 DDIT3P35638 169 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 NPTX2P47972 431 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 MCM6Q14566 821 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 MAPK6Q16659 721 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 PAN2Q504Q3 1202 aaKnown RBP22.12■■□□□ 1.13
COL9A2-210ENST00000495948 ARSHQ5FYA8 562 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 UBXN11Q5T124 520 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 CCDC73Q6ZRK6 1079 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 FBXO22Q8NEZ5 403 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 KIFC3Q9BVG8 833 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 ARHGAP28Q9P2N2 729 aa22.12■■□□□ 1.13
COL9A2-210ENST00000495948 MRPL42Q9Y6G3 142 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms