RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 NR5A1Q13285 461 aa20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 SMC1AQ14683 1233 aaKnown RBP20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 BMS1Q14692 1282 aaKnown RBP20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 EARS2Q5JPH6 523 aaKnown RBP20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 LLGL2Q6P1M3 1020 aa20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 TMEM184AQ6ZMB5 413 aa20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 ZNF579Q8NAF0 562 aaKnown RBP20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 PRPF31Q8WWY3 499 aaKnown RBP20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 TMEM169Q96HH4 297 aa20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 DHX33Q9H6R0 707 aaKnown RBP20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 ZSWIM4Q9H7M6 989 aa20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 IFT122Q9HBG6 1241 aa20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 BMP2KQ9NSY1 1161 aaPredicted RBP20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 RGL1Q9NZL6 768 aa20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 INPP5FQ9Y2H2 1132 aa20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 FAM205CA6NFA0 338 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 LOC730098B7Z3J9 87 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 NT5C1B-RDH14C9J2C7 533 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 SRGAP2CP0DJJ0 459 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 FDPSP14324 419 aaKnown RBP20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 CA8P35219 290 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 CYP4A11Q02928 519 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 RNASELQ05823 741 aaKnown RBP20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 KCNC3Q14003 757 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 ME3Q16798 604 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 XKR9Q5GH70 373 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 ANKRD54Q6NXT1 300 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 MRPL43Q8N983 215 aaKnown RBP20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 TCP11Q8WWU5 503 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 GTF3C6Q969F1 213 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 PGBD4Q96DM1 585 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 DYDC2Q96IM9 177 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 RPGRIP1Q96KN7 1286 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 AGPAT5Q9NUQ2 364 aa20.58■□□□□ 0.89
CLCNKA-207ENST00000495784 CARNS1A5YM72 827 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 GAS2O43903 313 aaKnown RBP20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 EIF5BO60841 1220 aaKnown RBP20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 ZNF623O75123 536 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 LAMTOR4Q0VGL1 99 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 CTTNQ14247 550 aaKnown RBP20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 EMC2Q15006 297 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 NOMO2Q5JPE7 1267 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 SRGAP1Q7Z6B7 1085 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 TPH2Q8IWU9 490 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 SUSD6Q92537 303 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 APOL5Q9BWW9 433 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 TBC1D13Q9NVG8 400 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 PCDHB2Q9Y5E7 798 aa20.57■□□□□ 0.88
CLCNKA-207ENST00000495784 C2orf71A6NGG8 1288 aa20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 LARGE1O95461 756 aa20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 HOXB8P17481 243 aaPredicted RBP20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 SPIRE1Q08AE8 756 aa20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 TRIM29Q14134 588 aa20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 CBX2Q14781 532 aaPredicted RBP20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 TMEM87AQ8NBN3 555 aa20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 URGCPQ8TCY9 931 aa20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 EDAQ92838 391 aa20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 CASP10Q92851 521 aa20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 TNFRSF25Q93038 417 aa20.56■□□□□ 0.88
CLCNKA-207ENST00000495784 MEIS3P2A8K0S8 358 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 ASAP2O43150 1006 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 OFD1O75665 1012 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 NEK4P51957 841 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 FOSBP53539 338 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 CALCRLQ16602 461 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 SYCE2Q6PIF2 218 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 HFE2Q6ZVN8 426 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 VPS52Q8N1B4 723 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 RNF149Q8NC42 400 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 NSUN7Q8NE18 718 aaKnown RBP20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 MTRQ99707 1265 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 GBP3Q9H0R5 595 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 S1PR5Q9H228 398 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 NRDE2Q9H7Z3 1164 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 MINDY3Q9H8M7 445 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 PCDHA12Q9UN75 941 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 HCFC2Q9Y5Z7 792 aa20.55■□□□□ 0.88
CLCNKA-207ENST00000495784 CXCL14O95715 111 aa20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 TPRNQ4KMQ1 711 aa20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 ERICH6BQ5W0A0 696 aa20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 FERMT3Q86UX7 667 aa20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 TMEM173Q86WV6 379 aaPredicted RBP20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 DIS3L2Q8IYB7 885 aaKnown RBP20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 IGSF21Q96ID5 467 aa20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 MFSD14AQ96MC6 490 aa20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 CCDC43Q96MW1 224 aaKnown RBP20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 EIF2AK1Q9BQI3 630 aaKnown RBP20.54■□□□□ 0.88
CLCNKA-207ENST00000495784 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 BTBD18B2RXH4 712 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 ZBTB39O15060 712 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 NEMFO60524 1076 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 JAK2O60674 1132 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 CLASP2O75122 1294 aaKnown RBP20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 ERLIN2O94905 339 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 SLITRK3O94933 977 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 GALTP07902 379 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 CES5AQ6NT32 575 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 DDX53Q86TM3 631 aaKnown RBP20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 ZBP1Q9H171 429 aa20.53■□□□□ 0.88
CLCNKA-207ENST00000495784 TTC12Q9H892 705 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms