RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ERVK-5Q9HDB9 667 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 KMT5AQ9NQR1 393 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 EVPLQ92817 2033 aa18.89■□□□□ 0.61
HDAC6-235ENST00000495515 TCHHQ07283 1943 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 SFI1A8K8P3 1242 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 ZBBXA8MT70 800 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 ACTN4O43707 911 aaKnown RBP18.88■□□□□ 0.61
HDAC6-235ENST00000495515 PRPF40AO75400 957 aaKnown RBP18.88■□□□□ 0.61
HDAC6-235ENST00000495515 ERLIN2O94905 339 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 MYL1P05976 194 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 IDEP14735 1019 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 ZSCAN20P17040 1043 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-235ENST00000495515 GAP43P17677 238 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 ABCD1P33897 745 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 NPTX2P47972 431 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 KCNJ6P48051 423 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 ZNF131P52739 623 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 LONRF3Q496Y0 759 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 CDCA2Q69YH5 1023 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-235ENST00000495515 CCDC65Q8IXS2 484 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 BSNDQ8WZ55 320 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 VWCEQ96DN2 955 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 RNPC3Q96LT9 517 aaKnown RBP18.88■□□□□ 0.61
HDAC6-235ENST00000495515 C7orf25Q9BPX7 421 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 NTPCRQ9BSD7 190 aaKnown RBP18.88■□□□□ 0.61
HDAC6-235ENST00000495515 OSBPL7Q9BZF2 842 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 TRIM9Q9C026 710 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 CHST12Q9NRB3 414 aa18.88■□□□□ 0.61
HDAC6-235ENST00000495515 A0A1W2PPC1 479 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 DENND3A2RUS2 1198 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 AFMP43652 599 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 FXR1P51114 621 aaKnown RBP eCLIP18.87■□□□□ 0.61
HDAC6-235ENST00000495515 MAPK6Q16659 721 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 CNNM4Q6P4Q7 775 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 KRBA2Q6ZNG9 492 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 TDHQ8IZJ6 230 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 STAMQ92783 540 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 PRIMPOLQ96LW4 560 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 PRMT7Q9NVM4 692 aaPredicted RBP18.87■□□□□ 0.61
HDAC6-235ENST00000495515 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
HDAC6-235ENST00000495515 SEL1LQ9UBV2 794 aa18.87■□□□□ 0.61
HDAC6-235ENST00000495515 K7ERI5 159 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 TRAK2O60296 914 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 CSDE1O75534 798 aaKnown RBP18.86■□□□□ 0.61
HDAC6-235ENST00000495515 AXLP30530 894 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 ASIC1P78348 528 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 MBTD1Q05BQ5 628 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 SHHQ15465 462 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 FAM178BQ8IXR5 827 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 FMR1NBQ8N0W7 255 aaPredicted RBP18.86■□□□□ 0.61
HDAC6-235ENST00000495515 DNAJC19Q96DA6 116 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 PAGE5Q96GU1 130 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 MINDY3Q9H8M7 445 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 DACT1Q9NYF0 836 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 HOOK1Q9UJC3 728 aaKnown RBP18.86■□□□□ 0.61
HDAC6-235ENST00000495515 SLC4A7Q9Y6M7 1214 aa18.86■□□□□ 0.61
HDAC6-235ENST00000495515 KINO60870 393 aaKnown RBP18.85■□□□□ 0.61
HDAC6-235ENST00000495515 GADD45BO75293 160 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-235ENST00000495515 AMHP03971 560 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 FGFR4P22455 802 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 FAM187BQ17R55 369 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 HERC4Q5GLZ8 1057 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-235ENST00000495515 C9orf50Q5SZB4 431 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 TIGD1Q96MW7 591 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 PRO3102Q9H379 93 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 FZD8Q9H461 694 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 TMEM134Q9H6X4 195 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 C1orf112Q9NSG2 853 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 AGPAT5Q9NUQ2 364 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 PANK4Q9NVE7 773 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 ARHGAP28Q9P2N2 729 aa18.85■□□□□ 0.61
HDAC6-235ENST00000495515 PIN4Q9Y237 131 aaKnown RBP18.85■□□□□ 0.61
HDAC6-235ENST00000495515 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-235ENST00000495515 SLC16A4O15374 487 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 GTPBP6O43824 516 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-235ENST00000495515 PRKCBP05771 671 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 MAPTP10636 758 aaKnown RBP18.84■□□□□ 0.61
HDAC6-235ENST00000495515 LIG1P18858 919 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 STRN3Q13033 797 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 TMEM132AQ24JP5 1023 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 RASIP1Q5U651 963 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 PPP4R3CPQ6ZMV5 832 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 ENGASEQ8NFI3 743 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 PHOSPHO2Q8TCD6 241 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 CCDC47Q96A33 483 aaKnown RBP18.84■□□□□ 0.61
HDAC6-235ENST00000495515 CCDC51Q96ER9 411 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 SLC9A7Q96T83 725 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 ADAM2Q99965 735 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 KIFC3Q9BVG8 833 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 TSPYL2Q9H2G4 693 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-235ENST00000495515 TMX1Q9H3N1 280 aa18.84■□□□□ 0.61
HDAC6-235ENST00000495515 ADGRA3Q8IWK6 1321 aa18.83■□□□□ 0.61
HDAC6-235ENST00000495515 PVALEFA0A1B0GWK0 134 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 FRMD3A2A2Y4 597 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 K7ENM7 598 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 ACKR2O00590 384 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 ENPP3O14638 875 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 NCKAP1LP55160 1127 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 WDR5P61964 334 aaKnown RBP18.83■□□□□ 0.6
HDAC6-235ENST00000495515 PRPF4BQ13523 1007 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms