RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 DENND3A2RUS2 1198 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 SLC16A3O15427 465 aaKnown RBP11.33□□□□□ -0.6
SAMM50-206ENST00000494795 LY6KQ17RY6 165 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 ZNF746Q6NUN9 644 aaPredicted RBP11.33□□□□□ -0.6
SAMM50-206ENST00000494795 TMCO3Q6UWJ1 677 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 ZNF662Q6ZS27 426 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 CEP112Q8N8E3 955 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 OSBPL9Q96SU4 736 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 FUT8Q9BYC5 575 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 PLCB1Q9NQ66 1216 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 NAGPAQ9UK23 515 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 FRMD4BQ9Y2L6 1034 aa11.33□□□□□ -0.6
SAMM50-206ENST00000494795 OTOFQ9HC10 1997 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 GRID2IPA4D2P6 1211 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 ZSCAN5CA6NGD5 496 aaPredicted RBP11.32□□□□□ -0.6
SAMM50-206ENST00000494795 C19orf81C9J6K1 198 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 F8VZ95 297 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 N4BP1O75113 896 aaKnown RBP11.32□□□□□ -0.6
SAMM50-206ENST00000494795 ARIH2O95376 493 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 MAP2K1Q02750 393 aaPredicted RBP11.32□□□□□ -0.6
SAMM50-206ENST00000494795 LONRF2Q1L5Z9 754 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 ZBTB41Q5SVQ8 909 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 ZBTB45Q96K62 511 aaPredicted RBP11.32□□□□□ -0.6
SAMM50-206ENST00000494795 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 OGFRQ9NZT2 677 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 PTPRFP10586 1907 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 ABCB4P21439 1286 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 GTF2BQ00403 316 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 TRADDQ15628 312 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 WHAMMP3Q1A5X7 153 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 ABHD15Q6UXT9 468 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 LBX2Q6XYB7 198 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 U2AF1L4Q8WU68 220 aaKnown RBP11.32□□□□□ -0.6
SAMM50-206ENST00000494795 PCYT2Q99447 389 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 HAPLN2Q9GZV7 340 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 SLC9A2Q9UBY0 812 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 DMGDHQ9UI17 866 aaKnown RBP11.32□□□□□ -0.6
SAMM50-206ENST00000494795 HTTP42858 3142 aa11.32□□□□□ -0.6
SAMM50-206ENST00000494795 PJA2O43164 708 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 CNMDO75829 334 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 CNGA1P29973 690 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 MYL7Q01449 175 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 TTLL12Q14166 644 aaPredicted RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 ALKBH5Q6P6C2 394 aaKnown RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 CPNE8Q86YQ8 564 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 CAGE1Q8TC20 777 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 COPS5Q92905 334 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 METTL14Q9HCE5 456 aaKnown RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 SEL1LQ9UBV2 794 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 TBX20Q9UMR3 447 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 LYPLA2O95372 231 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 GJB1P08034 283 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 MARK3P27448 753 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 GJA5P36382 358 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 KRT76Q01546 638 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 SUPT20HL1Q3ZLR7 823 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 BEND6Q5SZJ8 279 aaPredicted RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 GJC2Q5T442 439 aaPredicted RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 DHX38Q92620 1227 aaKnown RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 LRRC1Q9BTT6 524 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 EDEM3Q9BZQ6 932 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 KCND2Q9NZV8 630 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 SPATA31C2B4DYI2 1134 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 TACC1O75410 805 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 VAMP7P51809 220 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 NCKAP1LP55160 1127 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 NAB2Q15742 525 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 EPC2Q52LR7 807 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 NOL9Q5SY16 702 aaKnown RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 TRIM58Q8NG06 486 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 SYN2Q92777 582 aaPredicted RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 DCPSQ96C86 337 aaKnown RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 GPRASP2Q96D09 838 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 ARHGEF26Q96DR7 871 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 ASCC2Q9H1I8 757 aaPredicted RBP11.31□□□□□ -0.6
SAMM50-206ENST00000494795 JRKLQ9Y4A0 524 aa11.31□□□□□ -0.6
SAMM50-206ENST00000494795 H3BQF6 201 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 POLR3GO15318 223 aaPredicted RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 CYP2C8P10632 490 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 MUTP22033 750 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 UBA1P22314 1058 aaKnown RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 SSTR3P32745 418 aaPredicted RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 JAK3P52333 1124 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 TAF3Q5VWG9 929 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 MSANTD4Q8NCY6 345 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 NEK9Q8TD19 979 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 PPP1R13LQ8WUF5 828 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 FGD4Q96M96 766 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 ACCSQ96QU6 501 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 KMT5AQ9NQR1 393 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 PDLIM7Q9NR12 457 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 CYP26B1Q9NR63 512 aa11.3□□□□□ -0.6
SAMM50-206ENST00000494795 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
SAMM50-206ENST00000494795 RBM12Q9NTZ6 932 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms