RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 NPEPPSP55786 919 aa6.29□□□□□ -1.4
CCDC66-222ENST00000494672 SMAD3P84022 425 aaKnown RBP6.29□□□□□ -1.4
CCDC66-222ENST00000494672 PURAQ00577 322 aaKnown RBP6.29□□□□□ -1.4
CCDC66-222ENST00000494672 LRRC32Q14392 662 aa6.29□□□□□ -1.4
CCDC66-222ENST00000494672 FNDC7Q5VTL7 733 aa6.29□□□□□ -1.4
CCDC66-222ENST00000494672 CREB3L3Q68CJ9 461 aa6.29□□□□□ -1.4
CCDC66-222ENST00000494672 Q6ZRM9 215 aa6.29□□□□□ -1.4
CCDC66-222ENST00000494672 CHFRQ96EP1 664 aa6.29□□□□□ -1.4
CCDC66-222ENST00000494672 RNPC3Q96LT9 517 aaKnown RBP6.29□□□□□ -1.4
CCDC66-222ENST00000494672 XDHP47989 1333 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 KPNA6O60684 536 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 OPHN1O60890 802 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 POU3F2P20265 443 aaPredicted RBP6.28□□□□□ -1.4
CCDC66-222ENST00000494672 C21orf62-AS1Q17RA5 79 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 GLIPR1L2Q4G1C9 344 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 CRB2Q5IJ48 1285 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 UNQ6494/PRO21346Q6UXR6 183 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 C16orf86Q6ZW13 317 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 LRRTM3Q86VH5 581 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 NXPE1Q8N323 547 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 EFHBQ8N7U6 833 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 APPBP2Q92624 585 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 CCDC136Q96JN2 1154 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 CEP89Q96ST8 783 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 GPR87Q9BY21 358 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 ZMAT4Q9H898 229 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 H2AFY2Q9P0M6 372 aaPredicted RBP6.28□□□□□ -1.4
CCDC66-222ENST00000494672 CD2APQ9Y5K6 639 aa6.28□□□□□ -1.4
CCDC66-222ENST00000494672 MYPNQ86TC9 1320 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 GOLGA6L6A8MZA4 724 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 MTSS1O43312 755 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 IPO13O94829 963 aaKnown RBP6.27□□□□□ -1.41
CCDC66-222ENST00000494672 INHBCP55103 352 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 DSG1Q02413 1049 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 SART3Q15020 963 aaKnown RBP6.27□□□□□ -1.41
CCDC66-222ENST00000494672 CNNM4Q6P4Q7 775 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 ESPNLQ6ZVH7 1005 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 AHI1Q8N157 1196 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 CHTF18Q8WVB6 975 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 NINJ1Q92982 152 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 CLIP3Q96DZ5 547 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 ZNF512Q96ME7 567 aaPredicted RBP6.27□□□□□ -1.41
CCDC66-222ENST00000494672 MTFR1LQ9H019 292 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 SLC2A4RGQ9NR83 387 aa6.27□□□□□ -1.41
CCDC66-222ENST00000494672 THG1LQ9NWX6 298 aaKnown RBP6.27□□□□□ -1.41
CCDC66-222ENST00000494672 USP36Q9P275 1121 aaKnown RBP6.27□□□□□ -1.41
CCDC66-222ENST00000494672 OVOL3O00110 214 aa6.26□□□□□ -1.41
CCDC66-222ENST00000494672 KPNA1P52294 538 aaPredicted RBP6.26□□□□□ -1.41
CCDC66-222ENST00000494672 SPIDRQ14159 915 aa6.26□□□□□ -1.41
CCDC66-222ENST00000494672 TICAM2Q86XR7 235 aa6.26□□□□□ -1.41
CCDC66-222ENST00000494672 ELOA2Q8IYF1 753 aaPredicted RBP6.26□□□□□ -1.41
CCDC66-222ENST00000494672 ATXN2LQ8WWM7 1075 aaKnown RBP6.26□□□□□ -1.41
CCDC66-222ENST00000494672 LARP4BQ92615 738 aaKnown RBP6.26□□□□□ -1.41
CCDC66-222ENST00000494672 MNTQ99583 582 aa6.26□□□□□ -1.41
CCDC66-222ENST00000494672 IKZF4Q9H2S9 585 aa6.26□□□□□ -1.41
CCDC66-222ENST00000494672 PIF1Q9H611 641 aa6.26□□□□□ -1.41
CCDC66-222ENST00000494672 A0A087X1B8 175 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 A0A0A6YYK5 440 aaPredicted RBP6.25□□□□□ -1.41
CCDC66-222ENST00000494672 ST20-MTHFSA0A0A6YYL1 179 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 ZNF891A8MT65 544 aaPredicted RBP6.25□□□□□ -1.41
CCDC66-222ENST00000494672 NRP1O14786 923 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 CLSTN1O94985 981 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 PCDH8O95206 1070 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 SCNN1BP51168 640 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 OCRLQ01968 901 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 MDGA1Q8NFP4 955 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 SOX7Q9BT81 388 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 FANCLQ9NW38 375 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 C11orf21Q9P2W6 132 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 PCDHB6Q9Y5E3 794 aa6.25□□□□□ -1.41
CCDC66-222ENST00000494672 ELL2O00472 640 aaPredicted RBP6.24□□□□□ -1.41
CCDC66-222ENST00000494672 GAAP10253 952 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 GNAT2P19087 354 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 XPAP23025 273 aaPredicted RBP6.24□□□□□ -1.41
CCDC66-222ENST00000494672 PTGS2P35354 604 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 RABGGTBP53611 331 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 TOB2Q14106 344 aaPredicted RBP6.24□□□□□ -1.41
CCDC66-222ENST00000494672 PPM1KQ8N3J5 372 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 CDYL2Q8N8U2 506 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 PPP1R14CQ8TAE6 165 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 ST8SIA2Q92186 375 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 FERMT2Q96AC1 680 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 ZNF496Q96IT1 587 aaPredicted RBP6.24□□□□□ -1.41
CCDC66-222ENST00000494672 PRRX2Q99811 253 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 MSRAQ9UJ68 235 aa6.24□□□□□ -1.41
CCDC66-222ENST00000494672 KLRG2A4D1S0 409 aaPredicted RBP6.23□□□□□ -1.41
CCDC66-222ENST00000494672 TGM5O43548 720 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 SLC25A3Q00325 362 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 TKFCQ3LXA3 575 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 RABL3Q5HYI8 236 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 GPR158Q5T848 1215 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 HTR3DQ70Z44 454 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 APBB1IPQ7Z5R6 666 aaPredicted RBP6.23□□□□□ -1.41
CCDC66-222ENST00000494672 NIM1KQ8IY84 436 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 ULK2Q8IYT8 1036 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 UNC5BQ8IZJ1 945 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 MB21D1Q8N884 522 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 EPC1Q9H2F5 836 aa6.23□□□□□ -1.41
CCDC66-222ENST00000494672 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.23□□□□□ -1.41
CCDC66-222ENST00000494672 ING3Q9NXR8 418 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms