RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 CBWD5Q5RIA9 395 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 SNRNP48Q6IEG0 339 aaKnown RBP12.2□□□□□ -0.46
LDHA-211ENST00000494573 GJB7Q6PEY0 223 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 CCNI2Q6ZMN8 369 aaPredicted RBP12.2□□□□□ -0.46
LDHA-211ENST00000494573 CATSPERGQ6ZRH7 1159 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 OTUD6AQ7L8S5 288 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 LMO3Q8TAP4 145 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 NSUN6Q8TEA1 469 aaKnown RBP12.2□□□□□ -0.46
LDHA-211ENST00000494573 SPIRE2Q8WWL2 714 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 TAF4BQ92750 862 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 PBKQ96KB5 322 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 SYT11Q9BT88 431 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 ACAD9Q9H845 621 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 C17orf75Q9HAS0 396 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 ST7Q9NRC1 585 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 TMOD4Q9NZQ9 345 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 ZNF214Q9UL59 606 aaPredicted RBP12.2□□□□□ -0.46
LDHA-211ENST00000494573 RIPK3Q9Y572 518 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 PCDHA10Q9Y5I2 948 aa12.2□□□□□ -0.46
LDHA-211ENST00000494573 EMSYQ7Z589 1322 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 PSAPP07602 524 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 KCNA2P16389 499 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 ABCD1P33897 745 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 SMTNP53814 917 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 HMGCS2P54868 508 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 RTP1P59025 263 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 EPC2Q52LR7 807 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 SLFN11Q7Z7L1 901 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 SYCE1Q8N0S2 351 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 TPCN2Q8NHX9 752 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 OLIG1Q8TAK6 271 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 LNX1Q8TBB1 728 aaPredicted RBP12.19□□□□□ -0.46
LDHA-211ENST00000494573 U2AF1L4Q8WU68 220 aaKnown RBP12.19□□□□□ -0.46
LDHA-211ENST00000494573 KIFAP3Q92845 792 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 ATP6V0A1Q93050 837 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 ZKSCAN4Q969J2 545 aaPredicted RBP12.19□□□□□ -0.46
LDHA-211ENST00000494573 KLRG1Q96E93 195 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 WNK4Q96J92 1243 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 CALR3Q96L12 384 aaKnown RBP12.19□□□□□ -0.46
LDHA-211ENST00000494573 TEX13BQ9BXU2 312 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 GPR88Q9GZN0 384 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 GPRC5DQ9NZD1 345 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 HSPBP1Q9NZL4 362 aa12.19□□□□□ -0.46
LDHA-211ENST00000494573 SLC16A4O15374 487 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 CLSTN1O94985 981 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 STBD1O95210 358 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 KIF4AO95239 1232 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 FTCDO95954 541 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 TMEM253P0C7T8 217 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 AARSP49588 968 aaKnown RBP eCLIP12.18□□□□□ -0.46
LDHA-211ENST00000494573 NUBP1P53384 320 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 PEX3P56589 373 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 DMP1Q13316 513 aaPredicted RBP12.18□□□□□ -0.46
LDHA-211ENST00000494573 PLS1Q14651 629 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 TMEM132BQ14DG7 1078 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 RPS6KA1Q15418 735 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 SUPT20HL1Q3ZLR7 823 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 ASTLQ6HA08 431 aaPredicted RBP12.18□□□□□ -0.46
LDHA-211ENST00000494573 MAEAQ7L5Y9 396 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 MAP4K3Q8IVH8 894 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 LRRC57Q8N9N7 239 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 TRPM4Q8TD43 1214 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 AENQ8WTP8 325 aaKnown RBP12.18□□□□□ -0.46
LDHA-211ENST00000494573 KCNN1Q92952 543 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 MED4Q9NPJ6 270 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 HOXC10Q9NYD6 342 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 CYP39A1Q9NYL5 469 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 KCNG1Q9UIX4 513 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 TBX20Q9UMR3 447 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 STXBP5LQ9Y2K9 1186 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 AFG3L2Q9Y4W6 797 aa12.18□□□□□ -0.46
LDHA-211ENST00000494573 SPATA31C2B4DYI2 1134 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 H0YCG3 227 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 DGAT1O75907 488 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 TNFAIP3P21580 790 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 SCP2P22307 547 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 CXCR5P32302 372 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 ICAM3P32942 547 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 NOP2P46087 812 aaKnown RBP12.17□□□□□ -0.46
LDHA-211ENST00000494573 GNPTABQ3T906 1256 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 C1orf220Q5T0J3 134 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 FAM102BQ5T8I3 360 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 PLA2G4FQ68DD2 849 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 PHLDB3Q6NSJ2 640 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 C8orf74Q6P047 294 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 ANO5Q75V66 913 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 GPC2Q8N158 579 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 TMEM161BQ8NDZ6 487 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 MCPH1Q8NEM0 835 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 CHST13Q8NET6 341 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 FAM71BQ8TC56 605 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 TMC2Q8TDI7 906 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 CBWD1Q9BRT8 395 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
LDHA-211ENST00000494573 LRRC1Q9BTT6 524 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 SELENOOQ9BVL4 669 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 PCIF1Q9H4Z3 704 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 PDE11AQ9HCR9 933 aa12.17□□□□□ -0.46
LDHA-211ENST00000494573 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
LDHA-211ENST00000494573 PDLIM7Q9NR12 457 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms