RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 SLC9C1Q4G0N8 1177 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 CELF3Q5SZQ8 465 aaKnown RBP18.04■□□□□ 0.48
ATG4B-225ENST00000494465 KCNV1Q6PIU1 500 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 INTS8Q75QN2 995 aaKnown RBP18.04■□□□□ 0.48
ATG4B-225ENST00000494465 IRF2BP2Q7Z5L9 587 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 ANKRD13CQ8N6S4 541 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 PCDHA13Q9Y5I0 950 aa18.04■□□□□ 0.48
ATG4B-225ENST00000494465 RBAK-RBAKDNI3L0D1 243 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 SPA17Q15506 151 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 HSDL1Q3SXM5 330 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 TMEM63BQ5T3F8 832 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 ANKRD23Q86SG2 305 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 GPR20Q99678 358 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 DEF6Q9H4E7 631 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 MLXIPQ9HAP2 919 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 MYO6Q9UM54 1294 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 DUSP10Q9Y6W6 482 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 AKR1B10O60218 316 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 ADRB2P07550 413 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 GFPT1Q06210 699 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-225ENST00000494465 GJB7Q6PEY0 223 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 KCNN1Q92952 543 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 TMEM143Q96AN5 459 aa18.03■□□□□ 0.48
ATG4B-225ENST00000494465 IFIH1Q9BYX4 1025 aaKnown RBP18.03■□□□□ 0.48
ATG4B-225ENST00000494465 CELF2O95319 508 aaKnown RBP18.02■□□□□ 0.48
ATG4B-225ENST00000494465 ARL2P36404 184 aa18.02■□□□□ 0.48
ATG4B-225ENST00000494465 VAMP7P51809 220 aa18.02■□□□□ 0.48
ATG4B-225ENST00000494465 TDRD12Q587J7 1177 aaKnown RBP18.02■□□□□ 0.48
ATG4B-225ENST00000494465 FAM160B1Q5W0V3 765 aa18.02■□□□□ 0.48
ATG4B-225ENST00000494465 SPRYD7Q5W111 196 aa18.02■□□□□ 0.48
ATG4B-225ENST00000494465 IQCEQ6IPM2 695 aa18.02■□□□□ 0.48
ATG4B-225ENST00000494465 LMO3Q8TAP4 145 aa18.02■□□□□ 0.48
ATG4B-225ENST00000494465 IFT74Q96LB3 600 aa18.02■□□□□ 0.48
ATG4B-225ENST00000494465 MORF4L1Q9UBU8 362 aa18.02■□□□□ 0.48
ATG4B-225ENST00000494465 KRT86O43790 486 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 LGR5O75473 907 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 KRT13P13646 458 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 GLRA2P23416 452 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 PPP3CAQ08209 521 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 ASIC2Q16515 512 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 ZNF792Q3KQV3 632 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 ASAP3Q8TDY4 903 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 ANKRD7Q92527 254 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 PDGFCQ9NRA1 345 aa18.02■□□□□ 0.47
ATG4B-225ENST00000494465 GOLGA8IPA6NC78 632 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 GOLGA8JA6NMD2 632 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 CCNA1P78396 465 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 MYL7Q01449 175 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 ARID5AQ03989 594 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 CBWD2Q8IUF1 395 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 C2orf69Q8N8R5 385 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 COPS5Q92905 334 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 FBXL18Q96ME1 805 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 PTPN18Q99952 460 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 NRBP2Q9NSY0 501 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.01■□□□□ 0.472e-8■■□□□ 13.7
ATG4B-225ENST00000494465 V9GYY5 206 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-225ENST00000494465 EMSYQ7Z589 1322 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 CTAGE9A4FU28 777 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 RBM10P98175 930 aaKnown RBP18.01■□□□□ 0.47
ATG4B-225ENST00000494465 KLHL30Q0D2K2 578 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 BRDTQ58F21 947 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-225ENST00000494465 ARMCX2Q7L311 632 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 SLC7A3Q8WY07 619 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 SPAG5Q96R06 1193 aa18.01■□□□□ 0.47
ATG4B-225ENST00000494465 INTS2Q9H0H0 1204 aaKnown RBP18.01■□□□□ 0.47
ATG4B-225ENST00000494465 ASB14A6NK59 587 aa18■□□□□ 0.47
ATG4B-225ENST00000494465 ZBTB48P10074 688 aaPredicted RBP18■□□□□ 0.47
ATG4B-225ENST00000494465 ADORA2AP29274 412 aa18■□□□□ 0.47
ATG4B-225ENST00000494465 RFC5P40937 340 aa18■□□□□ 0.47
ATG4B-225ENST00000494465 PRKCIP41743 596 aa18■□□□□ 0.47
ATG4B-225ENST00000494465 GCLCP48506 637 aaPredicted RBP18■□□□□ 0.47
ATG4B-225ENST00000494465 KIF5AQ12840 1032 aa18■□□□□ 0.47
ATG4B-225ENST00000494465 SNRNP35Q16560 246 aaKnown RBP18■□□□□ 0.47
ATG4B-225ENST00000494465 TRIM50Q86XT4 487 aa18■□□□□ 0.47
ATG4B-225ENST00000494465 SAAL1Q96ER3 474 aa18■□□□□ 0.47
ATG4B-225ENST00000494465 NAPGQ99747 312 aaPredicted RBP18■□□□□ 0.47
ATG4B-225ENST00000494465 CARD6Q9BX69 1037 aa18■□□□□ 0.47
ATG4B-225ENST00000494465 PJA2O43164 708 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 PTK2Q05397 1052 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 CST9Q5W186 159 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 TSGA10Q9BZW7 698 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 MYH10P35580 1976 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 A0A087X0T9 212 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 ZBTB42B2RXF5 422 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 H0YCG3 227 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 MAFO75444 373 aaPredicted RBP17.99■□□□□ 0.47
ATG4B-225ENST00000494465 FAM228BP0C875 321 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 MAGEA1P43355 309 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 NAMPTP43490 491 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 SLC18A3Q16572 532 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 ZNF571Q7Z3V5 609 aaPredicted RBP17.99■□□□□ 0.47
ATG4B-225ENST00000494465 DHX37Q8IY37 1157 aaKnown RBP17.99■□□□□ 0.47
ATG4B-225ENST00000494465 ABRAQ8N0Z2 381 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 GPR88Q9GZN0 384 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 KCNG1Q9UIX4 513 aa17.99■□□□□ 0.47
ATG4B-225ENST00000494465 DIS3Q9Y2L1 958 aaKnown RBP17.99■□□□□ 0.47
ATG4B-225ENST00000494465 P4HA2O15460 535 aa17.98■□□□□ 0.47
ATG4B-225ENST00000494465 PNMA6AP0CW24 399 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-225ENST00000494465 TXNP10599 105 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms