RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
MINDY4-203ENST00000494187 PDCD2LQ9BRP1 358 aa10.06□□□□□ -0.8
MINDY4-203ENST00000494187 KCNMB3Q9NPA1 279 aa10.06□□□□□ -0.8
MINDY4-203ENST00000494187 CALCOCO1Q9P1Z2 691 aa10.06□□□□□ -0.8
MINDY4-203ENST00000494187 ASIC3Q9UHC3 531 aa10.06□□□□□ -0.8
MINDY4-203ENST00000494187 FAM184BQ9ULE4 1060 aa10.06□□□□□ -0.8
MINDY4-203ENST00000494187 MYH7P12883 1935 aa10.06□□□□□ -0.8
MINDY4-203ENST00000494187 IGKV6D-41A0A0C4DH26 115 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 GOLGA6CA6NDK9 693 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 WDR46O15213 610 aaKnown RBP10.05□□□□□ -0.8
MINDY4-203ENST00000494187 GOLGA6DP0CG33 693 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 CYP2C8P10632 490 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 SMARCA1P28370 1054 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 KCNJ1P48048 391 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 USP14P54578 494 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 TNNC1P63316 161 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 TRADDQ15628 312 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 IFI16Q16666 785 aaKnown RBP10.05□□□□□ -0.8
MINDY4-203ENST00000494187 LY6KQ17RY6 165 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 LLGL2Q6P1M3 1020 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 TMEM270Q6UE05 265 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 DYDC1Q8WWB3 177 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 ERGIC2Q96RQ1 377 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 C11orf70Q9BRQ4 267 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 JPH1Q9HDC5 661 aaPredicted RBP10.05□□□□□ -0.8
MINDY4-203ENST00000494187 C1orf112Q9NSG2 853 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 GOLGA6AQ9NYA3 693 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 ATP8A1Q9Y2Q0 1164 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 IRS2Q9Y4H2 1338 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 GJB6O95452 261 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 POTEJP0CG39 1038 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 TCP1P17987 556 aaKnown RBP10.05□□□□□ -0.8
MINDY4-203ENST00000494187 NUMBP49757 651 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 ITGB3BPQ13352 177 aaPredicted RBP10.05□□□□□ -0.8
MINDY4-203ENST00000494187 AGBL3Q8NEM8 1001 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 COPS5Q92905 334 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 NT5C1BQ96P26 610 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 MSTO1Q9BUK6 570 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 TEX13BQ9BXU2 312 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 PPANQ9NQ55 473 aaKnown RBP10.05□□□□□ -0.8
MINDY4-203ENST00000494187 PITPNM2Q9BZ72 1349 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 ZNF541Q9H0D2 1346 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 LRRC10BA6NIK2 292 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 NFKBIEO00221 500 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 OPLAHO14841 1288 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 PSMC5P62195 406 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 STXBP2Q15833 593 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 FAM47CQ5HY64 1035 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 KLHDC7AQ5VTJ3 777 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 RNF149Q8NC42 400 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 GMCL1P1Q8NEA9 526 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 MKL1Q969V6 931 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 CEP63Q96MT8 703 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 DNAJC7Q99615 494 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 PRDM16Q9HAZ2 1276 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 TAS2R14Q9NYV8 317 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 SLC9A2Q9UBY0 812 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 PPP1R9AQ9ULJ8 1098 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 EXOC7Q9UPT5 735 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 SNX24Q9Y343 169 aa10.05□□□□□ -0.8
MINDY4-203ENST00000494187 GOLGA6L10A0A0M3HER8 536 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 VWA5AO00534 786 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 PDXKO00764 312 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 EDIL3O43854 480 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 RNF40O75150 1001 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 CSPG5O95196 566 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 GGCXP38435 758 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 CARSP49589 748 aaKnown RBP10.04□□□□□ -0.8
MINDY4-203ENST00000494187 FSTL1Q12841 308 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 ZNF720Q7Z2F6 126 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 TRIM59Q8IWR1 403 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 LMBR1Q8WVP7 490 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 MAGOHBQ96A72 148 aaKnown RBP10.04□□□□□ -0.8
MINDY4-203ENST00000494187 SLC10A4Q96EP9 437 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 ACAD9Q9H845 621 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 GOLGA4Q13439 2230 aaKnown RBP10.04□□□□□ -0.8
MINDY4-203ENST00000494187 CCDC151A5D8V7 595 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 ANKRD63C9JTQ0 380 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 F5H423 210 aaPredicted RBP10.04□□□□□ -0.8
MINDY4-203ENST00000494187 PI4K2BG5E9Z4 385 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 THAP12O43422 761 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 KRT14P02533 472 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 PLA2G4AP47712 749 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 RARRES1P49788 294 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 SNRNP35Q16560 246 aaKnown RBP10.04□□□□□ -0.8
MINDY4-203ENST00000494187 FBXO16Q8IX29 292 aaPredicted RBP10.04□□□□□ -0.8
MINDY4-203ENST00000494187 C7orf31Q8N865 590 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 TRIM51Q9BSJ1 452 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 FHDC1Q9C0D6 1143 aaPredicted RBP10.04□□□□□ -0.8
MINDY4-203ENST00000494187 THAP2Q9H0W7 228 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 SNX12Q9UMY4 172 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 ITIH6Q6UXX5 1313 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 MYH8P13535 1937 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 PSAPP07602 524 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 PBX1P40424 430 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 PDE6CP51160 858 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 ACTR2P61160 394 aa10.04□□□□□ -0.8
MINDY4-203ENST00000494187 MRPS9P82933 396 aaKnown RBP10.04□□□□□ -0.8
MINDY4-203ENST00000494187 IFRD2Q12894 506 aaPredicted RBP10.04□□□□□ -0.8
MINDY4-203ENST00000494187 BFSP1Q12934 665 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms