RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 PHKA2P46019 1235 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 NRIP1P48552 1158 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 POLGP54098 1239 aaPredicted RBP9.54□□□□□ -0.88
LRCH3-219ENST00000494069 LAMTOR4Q0VGL1 99 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 ADAM15Q13444 863 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 NBR1Q14596 966 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 EMC2Q15006 297 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 ZNF174Q15697 407 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 NAALADL2Q58DX5 795 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 ZNF410Q86VK4 478 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 FAM178BQ8IXR5 827 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 THNSL1Q8IYQ7 743 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 ZNF710Q8N1W2 664 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 SLC7A3Q8WY07 619 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 C8orf76Q96K31 380 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 XPNPEP1Q9NQW7 623 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 RAPGEFL1Q9UHV5 662 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 PIN4Q9Y237 131 aaKnown RBP9.54□□□□□ -0.88
LRCH3-219ENST00000494069 PCDHB12Q9Y5F1 795 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 COL4A3BPQ9Y5P4 624 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 C5orf42Q9H799 3197 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 NT5C1B-RDH14C9J2C7 533 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 DKC1O60832 514 aaKnown RBP eCLIP9.53□□□□□ -0.88
LRCH3-219ENST00000494069 GLP2RO95838 553 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 SPATA31C1P0DKV0 1188 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 LAG3P18627 525 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 SFPQP23246 707 aaKnown RBP eCLIP9.53□□□□□ -0.88
LRCH3-219ENST00000494069 RFC5P40937 340 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 RBM25P49756 843 aaKnown RBP9.53□□□□□ -0.88
LRCH3-219ENST00000494069 AFF1P51825 1210 aaKnown RBP9.53□□□□□ -0.88
LRCH3-219ENST00000494069 UBXN11Q5T124 520 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 TWF2Q6IBS0 349 aaKnown RBP9.53□□□□□ -0.88
LRCH3-219ENST00000494069 KCNT2Q6UVM3 1135 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 FAM43BQ6ZT52 329 aaPredicted RBP9.53□□□□□ -0.88
LRCH3-219ENST00000494069 CATSPER4Q7RTX7 472 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 FERMT3Q86UX7 667 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 ABI1Q8IZP0 508 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 RNF149Q8NC42 400 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 ASAP3Q8TDY4 903 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 MICAL1Q8TDZ2 1067 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 PIGOQ8TEQ8 1089 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 PSPC1Q8WXF1 523 aaKnown RBP9.53□□□□□ -0.88
LRCH3-219ENST00000494069 JPH2Q9BR39 696 aaPredicted RBP9.53□□□□□ -0.88
LRCH3-219ENST00000494069 LLPHQ9BRT6 129 aaKnown RBP9.53□□□□□ -0.88
LRCH3-219ENST00000494069 CHST12Q9NRB3 414 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 AAASQ9NRG9 546 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 CLEC1BQ9P126 229 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 STK24Q9Y6E0 443 aa9.53□□□□□ -0.88
LRCH3-219ENST00000494069 FSCN2O14926 492 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 MBTPS2O43462 519 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 B4GALT3O60512 393 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 MED24O75448 989 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 OFD1O75665 1012 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 LYPLA2O95372 231 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 CD2BP2O95400 341 aaKnown RBP9.52□□□□□ -0.89
LRCH3-219ENST00000494069 EOMESO95936 686 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 HOXA11P31270 313 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-219ENST00000494069 TECP42680 631 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 RARRES1P49788 294 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 NDUFV1P49821 464 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 CDC42EP1Q00587 391 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 SAFBQ15424 915 aaKnown RBP eCLIP9.52□□□□□ -0.89
LRCH3-219ENST00000494069 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-219ENST00000494069 PLPP4Q5VZY2 271 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 MAEAQ7L5Y9 396 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 OTUD6AQ7L8S5 288 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 TMEM173Q86WV6 379 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-219ENST00000494069 CATSPER3Q86XQ3 398 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 GJD3Q8N144 294 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 LRRC43Q8N309 656 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 EFHBQ8N7U6 833 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 FBXO18Q8NFZ0 1043 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 VN1R2Q8NFZ6 395 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 MRPS27Q92552 414 aaKnown RBP9.52□□□□□ -0.89
LRCH3-219ENST00000494069 ZSCAN31Q96LW9 406 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-219ENST00000494069 MTRQ99707 1265 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 TRAIPQ9BWF2 469 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 INO80BQ9C086 356 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-219ENST00000494069 TLE6Q9H808 572 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 GPRC5CQ9NQ84 441 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 TLR9Q9NR96 1032 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 AGPAT5Q9NUQ2 364 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 FAM105AQ9NUU6 356 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 DACT1Q9NYF0 836 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 BARX2Q9UMQ3 279 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-219ENST00000494069 INPP5FQ9Y2H2 1132 aa9.52□□□□□ -0.89
LRCH3-219ENST00000494069 FAM86C2PA6NEL3 165 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 HIDE1A8MVS5 230 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 HOXA2O43364 376 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 NCK2O43639 380 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 GLRA2P23416 452 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 SSTR3P32745 418 aaPredicted RBP9.51□□□□□ -0.89
LRCH3-219ENST00000494069 ARL2P36404 184 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 TOB1P50616 345 aaPredicted RBP9.51□□□□□ -0.89
LRCH3-219ENST00000494069 BCAR1P56945 870 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 PLCB3Q01970 1234 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 UBE3AQ05086 875 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 CAPSQ13938 189 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 ECM1Q16610 540 aa9.51□□□□□ -0.89
LRCH3-219ENST00000494069 DUSP6Q16828 381 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms