RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 ZSCAN31Q96LW9 406 aaPredicted RBP10.89□□□□□ -0.67
UFD1-210ENST00000494054 ZNF558Q96NG5 402 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 LLPHQ9BRT6 129 aaKnown RBP10.89□□□□□ -0.67
UFD1-210ENST00000494054 TLE6Q9H808 572 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 FAM105AQ9NUU6 356 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 RAPGEFL1Q9UHV5 662 aa10.89□□□□□ -0.67
UFD1-210ENST00000494054 POTEMA6NI47 508 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 HIDE1A8MVS5 230 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 NT5C1B-RDH14C9J2C7 533 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 PI4K2BG5E9Z4 385 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 ASAP2O43150 1006 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 ZNF623O75123 536 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 OFD1O75665 1012 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 COL9A1P20849 921 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
UFD1-210ENST00000494054 ZP2Q05996 745 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 SAFBQ15424 915 aaKnown RBP eCLIP10.88□□□□□ -0.67
UFD1-210ENST00000494054 ZNF174Q15697 407 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 UBXN11Q5T124 520 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 PLPP4Q5VZY2 271 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 SRGAP1Q7Z6B7 1085 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 EXOC8Q8IYI6 725 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 SLC39A11Q8N1S5 342 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 RNF149Q8NC42 400 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 FBXO18Q8NFZ0 1043 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 ASAP3Q8TDY4 903 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 TCP11Q8WWU5 503 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 MTRQ99707 1265 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 C1QTNF1Q9BXJ1 281 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 C11orf16Q9NQ32 467 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 ANKEF1Q9NU02 776 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 AGPAT5Q9NUQ2 364 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 SPG21Q9NZD8 308 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 CD207Q9UJ71 328 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 BARX2Q9UMQ3 279 aaPredicted RBP10.88□□□□□ -0.67
UFD1-210ENST00000494054 LZTS1Q9Y250 596 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 PCDHB2Q9Y5E7 798 aa10.88□□□□□ -0.67
UFD1-210ENST00000494054 GAS2O43903 313 aaKnown RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 B4GALT3O60512 393 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 MED24O75448 989 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 EYA4O95677 639 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 ARL2P36404 184 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 RBM25P49756 843 aaKnown RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 RARRES1P49788 294 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 AFF1P51825 1210 aaKnown RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 BCAR1P56945 870 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 PTENP60484 403 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 SMAD4Q13485 552 aaKnown RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 DUSP6Q16828 381 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 AGMOQ6ZNB7 445 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 MRPL10Q7Z7H8 261 aaKnown RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 TMEM173Q86WV6 379 aaPredicted RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 CATSPER3Q86XQ3 398 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 ADHFE1Q8IWW8 467 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 TCF25Q9BQ70 676 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 MRPL9Q9BYD2 267 aaKnown RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 FOXP1Q9H334 677 aaPredicted RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 NRDE2Q9H7Z3 1164 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 SH2B1Q9NRF2 756 aaPredicted RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 TBC1D13Q9NVG8 400 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 PRKAG3Q9UGI9 489 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 PUF60Q9UHX1 559 aaKnown RBP10.87□□□□□ -0.67
UFD1-210ENST00000494054 FAM50BQ9Y247 325 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 INPP5FQ9Y2H2 1132 aa10.87□□□□□ -0.67
UFD1-210ENST00000494054 ARID2Q68CP9 1835 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 FAM86C2PA6NEL3 165 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 TSPAN1O60635 241 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 DGAT1O75907 488 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 SKIP12755 728 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 XRCC6P12956 609 aaKnown RBP eCLIP10.86□□□□□ -0.67
UFD1-210ENST00000494054 GLRA2P23416 452 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 PPM1AP35813 382 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 TECP42680 631 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 RAB27AP51159 221 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 HMGN5P82970 282 aaKnown RBP10.86□□□□□ -0.67
UFD1-210ENST00000494054 KRT17Q04695 432 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 MBTD1Q05BQ5 628 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 COASYQ13057 564 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 CAPSQ13938 189 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 KCNC3Q14003 757 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 NBR1Q14596 966 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 NOMO2Q5JPE7 1267 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 TTC38Q5R3I4 469 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 PDE12Q6L8Q7 609 aaKnown RBP10.86□□□□□ -0.67
UFD1-210ENST00000494054 GLB1LQ6UWU2 654 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 TMC7Q7Z402 723 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 ZNF280BQ86YH2 543 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 C4orf32Q8N8J7 132 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 FAM184AQ8NB25 1140 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 SMRP1Q8NCR6 262 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 SMG8Q8ND04 991 aaKnown RBP10.86□□□□□ -0.67
UFD1-210ENST00000494054 BCL7CQ8WUZ0 217 aaPredicted RBP10.86□□□□□ -0.67
UFD1-210ENST00000494054 LRFN3Q9BTN0 628 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 EIF2AQ9BY44 585 aaKnown RBP10.86□□□□□ -0.67
UFD1-210ENST00000494054 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 NGRNQ9NPE2 291 aaKnown RBP10.86□□□□□ -0.67
UFD1-210ENST00000494054 GPRC5CQ9NQ84 441 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 ENTPD7Q9NQZ7 604 aa10.86□□□□□ -0.67
UFD1-210ENST00000494054 DNAJB4Q9UDY4 337 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms