RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 MRPS6P82932 125 aaKnown RBP21.31■■□□□ 1
USP39-218ENST00000493829 CDCA2Q69YH5 1023 aaPredicted RBP21.31■■□□□ 1
USP39-218ENST00000493829 TAS1R3Q7RTX0 852 aa21.31■■□□□ 1
USP39-218ENST00000493829 RSPH3Q86UC2 560 aa21.31■■□□□ 1
USP39-218ENST00000493829 GUF1Q8N442 669 aaKnown RBP21.31■■□□□ 1
USP39-218ENST00000493829 RNF214Q8ND24 703 aa21.31■■□□□ 1
USP39-218ENST00000493829 GTPBP4Q9BZE4 634 aaKnown RBP21.31■■□□□ 1
USP39-218ENST00000493829 INO80BQ9C086 356 aaPredicted RBP21.31■■□□□ 1
USP39-218ENST00000493829 ADAMTS10Q9H324 1103 aa21.31■■□□□ 1
USP39-218ENST00000493829 MINDY3Q9H8M7 445 aa21.31■■□□□ 1
USP39-218ENST00000493829 IFT122Q9HBG6 1241 aa21.31■■□□□ 1
USP39-218ENST00000493829 TBX20Q9UMR3 447 aa21.31■■□□□ 1
USP39-218ENST00000493829 PCDHB13Q9Y5F0 798 aa21.31■■□□□ 1
USP39-218ENST00000493829 PHLPP2Q6ZVD8 1323 aa21.31■■□□□ 1
USP39-218ENST00000493829 M0QZ92 97 aa21.31■■□□□ 1
USP39-218ENST00000493829 GPR32O75388 356 aa21.31■■□□□ 1
USP39-218ENST00000493829 FGFR4P22455 802 aa21.31■■□□□ 1
USP39-218ENST00000493829 PMS1P54277 932 aaKnown RBP21.31■■□□□ 1
USP39-218ENST00000493829 GTF2BQ00403 316 aa21.31■■□□□ 1
USP39-218ENST00000493829 PAK1Q13153 545 aa21.31■■□□□ 1
USP39-218ENST00000493829 NECAB2Q7Z6G3 386 aa21.31■■□□□ 1
USP39-218ENST00000493829 GAS2L3Q86XJ1 694 aa21.31■■□□□ 1
USP39-218ENST00000493829 SYCP3Q8IZU3 236 aa21.31■■□□□ 1
USP39-218ENST00000493829 SLC17A8Q8NDX2 589 aa21.31■■□□□ 1
USP39-218ENST00000493829 NTPCRQ9BSD7 190 aaKnown RBP21.31■■□□□ 1
USP39-218ENST00000493829 STRA6Q9BX79 667 aa21.31■■□□□ 1
USP39-218ENST00000493829 CDY2AQ9Y6F7 541 aa21.31■■□□□ 1
USP39-218ENST00000493829 UBE4BO95155 1302 aa21.3■■□□□ 1
USP39-218ENST00000493829 H0YCG3 227 aa21.3■■□□□ 1
USP39-218ENST00000493829 EDN1P05305 212 aa21.3■■□□□ 1
USP39-218ENST00000493829 ZNF165P49910 485 aa21.3■■□□□ 1
USP39-218ENST00000493829 PTENP60484 403 aa21.3■■□□□ 1
USP39-218ENST00000493829 MBTD1Q05BQ5 628 aa21.3■■□□□ 1
USP39-218ENST00000493829 STRN3Q13033 797 aa21.3■■□□□ 1
USP39-218ENST00000493829 AOPEPQ8N6M6 819 aa21.3■■□□□ 1
USP39-218ENST00000493829 ZNF507Q8TCN5 953 aa21.3■■□□□ 1
USP39-218ENST00000493829 BICD1Q96G01 975 aa21.3■■□□□ 1
USP39-218ENST00000493829 ACCSQ96QU6 501 aa21.3■■□□□ 1
USP39-218ENST00000493829 NAT10Q9H0A0 1025 aaKnown RBP21.3■■□□□ 1
USP39-218ENST00000493829 C2orf40Q9H1Z8 148 aa21.3■■□□□ 1
USP39-218ENST00000493829 SEMA6BQ9H3T3 888 aa21.3■■□□□ 1
USP39-218ENST00000493829 ST6GALNAC4Q9H4F1 302 aa21.3■■□□□ 1
USP39-218ENST00000493829 MROH7Q68CQ1 1323 aa21.29■■□□□ 1
USP39-218ENST00000493829 TISP43B9A030 160 aa21.29■■□□□ 1
USP39-218ENST00000493829 K7ERI5 159 aa21.29■■□□□ 1
USP39-218ENST00000493829 PRKCBP05771 671 aa21.29■■□□□ 1
USP39-218ENST00000493829 ALCAMQ13740 583 aa21.29■■□□□ 1
USP39-218ENST00000493829 BMT2Q1RMZ1 405 aa21.29■■□□□ 1
USP39-218ENST00000493829 LRRC26Q2I0M4 334 aa21.29■■□□□ 1
USP39-218ENST00000493829 TRIM71Q2Q1W2 868 aaKnown RBP21.29■■□□□ 1
USP39-218ENST00000493829 COBLL1Q53SF7 1204 aa21.29■■□□□ 1
USP39-218ENST00000493829 ZNF410Q86VK4 478 aa21.29■■□□□ 1
USP39-218ENST00000493829 NME8Q8N427 588 aa21.29■■□□□ 1
USP39-218ENST00000493829 TMEM40Q8WWA1 233 aa21.29■■□□□ 1
USP39-218ENST00000493829 P2RX5Q93086 422 aa21.29■■□□□ 1
USP39-218ENST00000493829 CCDC113Q9H0I3 377 aa21.29■■□□□ 1
USP39-218ENST00000493829 TRPV2Q9Y5S1 764 aa21.29■■□□□ 1
USP39-218ENST00000493829 TLR3O15455 904 aaKnown RBP21.28■■□□□ 1
USP39-218ENST00000493829 KIF20AO95235 890 aa21.28■■□□□ 1
USP39-218ENST00000493829 EFNA5P52803 228 aa21.28■■□□□ 1
USP39-218ENST00000493829 TLE2Q04725 743 aa21.28■■□□□ 1
USP39-218ENST00000493829 KNOP1Q1ED39 458 aaKnown RBP21.28■■□□□ 1
USP39-218ENST00000493829 DHTKD1Q96HY7 919 aaPredicted RBP21.28■■□□□ 1
USP39-218ENST00000493829 SEZ6LQ9BYH1 1024 aa21.28■■□□□ 1
USP39-218ENST00000493829 CELF4Q9BZC1 486 aaKnown RBP21.28■■□□□ 1
USP39-218ENST00000493829 GCOM2Q9BZD3 368 aaPredicted RBP21.28■■□□□ 1
USP39-218ENST00000493829 CBX8Q9HC52 389 aa21.28■■□□□ 1
USP39-218ENST00000493829 KCNG1Q9UIX4 513 aa21.28■■□□□ 1
USP39-218ENST00000493829 B4GALT5O43286 388 aa21.28■■□□□ 1
USP39-218ENST00000493829 CD4P01730 458 aa21.28■■□□□ 1
USP39-218ENST00000493829 IQCF3P0C7M6 154 aa21.28■■□□□ 1
USP39-218ENST00000493829 MAPK6Q16659 721 aa21.28■■□□□ 1
USP39-218ENST00000493829 TMEM132AQ24JP5 1023 aa21.28■■□□□ 1
USP39-218ENST00000493829 ZNF618Q5T7W0 954 aa21.28■■□□□ 1
USP39-218ENST00000493829 LUZP1Q86V48 1076 aa21.28■■□□□ 1
USP39-218ENST00000493829 MAP4K3Q8IVH8 894 aa21.28■■□□□ 1
USP39-218ENST00000493829 HVCN1Q96D96 273 aa21.28■■□□□ 1
USP39-218ENST00000493829 ABHD8Q96I13 439 aa21.28■■□□□ 1
USP39-218ENST00000493829 MED15Q96RN5 788 aa21.28■■□□□ 1
USP39-218ENST00000493829 KCTD10Q9H3F6 313 aa21.28■■□□□ 1
USP39-218ENST00000493829 TTLL13PA6NNM8 815 aa21.27■■□□□ 1
USP39-218ENST00000493829 DCDC2CA8MYV0 355 aa21.27■■□□□ 1
USP39-218ENST00000493829 HNRNPDLO14979 420 aaKnown RBP21.27■■□□□ 1
USP39-218ENST00000493829 CHRNA1P02708 482 aa21.27■■□□□ 1
USP39-218ENST00000493829 CKBP12277 381 aa21.27■■□□□ 1
USP39-218ENST00000493829 PPP1R2P41236 205 aa21.27■■□□□ 1
USP39-218ENST00000493829 SNX17Q15036 470 aa21.27■■□□□ 1
USP39-218ENST00000493829 ANKRD40Q6AI12 368 aa21.27■■□□□ 1
USP39-218ENST00000493829 EEF2KMTQ96G04 330 aa21.27■■□□□ 1
USP39-218ENST00000493829 RWDD2AQ9UIY3 292 aa21.27■■□□□ 1
USP39-218ENST00000493829 CLIC2O15247 247 aa21.26■□□□□ 0.99
USP39-218ENST00000493829 DARSP14868 501 aaKnown RBP21.26■□□□□ 0.99
USP39-218ENST00000493829 CCNE1P24864 410 aa21.26■□□□□ 0.99
USP39-218ENST00000493829 CRYBB1P53674 252 aaPredicted RBP21.26■□□□□ 0.99
USP39-218ENST00000493829 MGAT3Q09327 533 aa21.26■□□□□ 0.99
USP39-218ENST00000493829 ANKRD33Q7Z3H0 272 aa21.26■□□□□ 0.99
USP39-218ENST00000493829 FAM200AQ8TCP9 573 aa21.26■□□□□ 0.99
USP39-218ENST00000493829 TSG101Q99816 390 aa21.26■□□□□ 0.99
USP39-218ENST00000493829 TARS2Q9BW92 718 aaKnown RBP21.26■□□□□ 0.99
USP39-218ENST00000493829 NFKBIZQ9BYH8 718 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms