RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 CBWD5Q5RIA9 395 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 ZNF746Q6NUN9 644 aaPredicted RBP10.46□□□□□ -0.74
NPHP3-209ENST00000493732 RNF207Q6ZRF8 634 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 NT5DC3Q86UY8 548 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 GLYCTKQ8IVS8 523 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 CD302Q8IX05 232 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 CPXCR1Q8N123 301 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 KIFAP3Q92845 792 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 GPRASP2Q96D09 838 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 RMDN3Q96TC7 470 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 AGPAT1Q99943 283 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 SENP7Q9BQF6 1050 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 SYT11Q9BT88 431 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 GLIS2Q9BZE0 524 aaPredicted RBP10.46□□□□□ -0.74
NPHP3-209ENST00000493732 CARD9Q9H257 536 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 POLD4Q9HCU8 107 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 EHD2Q9NZN4 543 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 COL20A1Q9P218 1284 aa10.46□□□□□ -0.74
NPHP3-209ENST00000493732 MYH11P35749 1972 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 GOLGA6L10A0A0M3HER8 536 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 KRIT1O00522 736 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 STAM2O75886 525 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 POLD1P28340 1107 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 CCND2P30279 289 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 GTF2H1P32780 548 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 RPS6P62753 249 aaKnown RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 MRPS9P82933 396 aaKnown RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 ITGB3BPQ13352 177 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 ARHGEF16Q5VV41 709 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 GJB7Q6PEY0 223 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 GSPT2Q8IYD1 628 aaKnown RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 METTL13Q8N6R0 699 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 LMO3Q8TAP4 145 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 LNX1Q8TBB1 728 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 SLC35G2Q8TBE7 412 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 SPIRE2Q8WWL2 714 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 IFT81Q8WYA0 676 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 GDAP1L1Q96MZ0 367 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 TRERF1Q96PN7 1200 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 PDCD2LQ9BRP1 358 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 TSPYL1Q9H0U9 437 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 TAOK3Q9H2K8 898 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 RAVER2Q9HCJ3 691 aaKnown RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 PXMP2Q9NR77 195 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 HSPBP1Q9NZL4 362 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 NFU1Q9UMS0 254 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 SMCHD1A6NHR9 2005 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 EMSYQ7Z589 1322 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 SHOX2O60902 331 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 TRIM49P0CI25 452 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 TRIM49CP0CI26 452 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 GZMAP12544 262 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 BAG6P46379 1132 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 CARSP49589 748 aaKnown RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 MXI1P50539 228 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 DNA2P51530 1060 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 MFAP3P55082 362 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 DMP1Q13316 513 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 MTMR3Q13615 1198 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 EPC2Q52LR7 807 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 LRIG3Q6UXM1 1119 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 SLC30A10Q6XR72 485 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 IQCKQ8N0W5 287 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 ATP6V0A1Q93050 837 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 TEPSINQ96N21 525 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 NTPCRQ9BSD7 190 aaKnown RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 BCAS3Q9H6U6 928 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 UBE2TQ9NPD8 197 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 FAM114A2Q9NRY5 505 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 SMARCAL1Q9NZC9 954 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 AJAP1Q9UKB5 411 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 PACSIN2Q9UNF0 486 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 NOC2LQ9Y3T9 749 aaKnown RBP10.45□□□□□ -0.74
NPHP3-209ENST00000493732 PCDHA10Q9Y5I2 948 aa10.45□□□□□ -0.74
NPHP3-209ENST00000493732 ASTN2O75129 1339 aaPredicted RBP10.44□□□□□ -0.74
NPHP3-209ENST00000493732 GOLGA6L10A6NI86 522 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 SART1O43290 800 aaKnown RBP10.44□□□□□ -0.74
NPHP3-209ENST00000493732 RAD51CO43502 376 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 ERLIN2O94905 339 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 VCAM1P19320 739 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 EIF2AK2P19525 551 aaKnown RBP10.44□□□□□ -0.74
NPHP3-209ENST00000493732 HSPA9P38646 679 aaKnown RBP10.44□□□□□ -0.74
NPHP3-209ENST00000493732 RTP1P59025 263 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 PPATQ06203 517 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 ARHGAP44Q17R89 818 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 DALRD3Q5D0E6 543 aaKnown RBP10.44□□□□□ -0.74
NPHP3-209ENST00000493732 XKR9Q5GH70 373 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 PHLDB3Q6NSJ2 640 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 C11orf63Q6NUN7 778 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 KSR1Q8IVT5 923 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 CDAN1Q8IWY9 1227 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 KLHL7Q8IXQ5 586 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 UBL4BQ8N7F7 174 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 MCPH1Q8NEM0 835 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 IL31RAQ8NI17 732 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 TMC2Q8TDI7 906 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 TAAR1Q96RJ0 339 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 MOV10L1Q9BXT6 1211 aaKnown RBP10.44□□□□□ -0.74
NPHP3-209ENST00000493732 GPR88Q9GZN0 384 aa10.44□□□□□ -0.74
NPHP3-209ENST00000493732 RAB17Q9H0T7 212 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms