RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 XRCC6P12956 609 aaKnown RBP eCLIP24.55■■□□□ 1.52
HLA-E-203ENST00000493699 RARRES1P49788 294 aa24.55■■□□□ 1.52
HLA-E-203ENST00000493699 RNF149Q8NC42 400 aa24.55■■□□□ 1.52
HLA-E-203ENST00000493699 MRPS27Q92552 414 aaKnown RBP24.55■■□□□ 1.52
HLA-E-203ENST00000493699 MSLNLQ96KJ4 702 aa24.55■■□□□ 1.52
HLA-E-203ENST00000493699 ARID2Q68CP9 1835 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 MEIS3P2A8K0S8 358 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 DGAT1O75907 488 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 PBX3P40426 434 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 NRIP1P48552 1158 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 POU5F1BQ06416 359 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 ORC2Q13416 577 aaPredicted RBP24.54■■□□□ 1.52
HLA-E-203ENST00000493699 ZNF174Q15697 407 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 PDE12Q6L8Q7 609 aaKnown RBP24.54■■□□□ 1.52
HLA-E-203ENST00000493699 RBM23Q86U06 439 aaKnown RBP24.54■■□□□ 1.52
HLA-E-203ENST00000493699 FAM184AQ8NB25 1140 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 MICAL1Q8TDZ2 1067 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 PIGOQ8TEQ8 1089 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 RSPH1Q8WYR4 309 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 LPPQ93052 612 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 ZNF558Q96NG5 402 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 CLEC1BQ9P126 229 aa24.54■■□□□ 1.52
HLA-E-203ENST00000493699 A0A087WWV3 80 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 GLP2RO95838 553 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 ARL2P36404 184 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 RAB27AP51159 221 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 MXD4Q14582 209 aaPredicted RBP24.53■■□□□ 1.52
HLA-E-203ENST00000493699 RABEP1Q15276 862 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 CATSPER3Q86XQ3 398 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 NOSTRINQ8IVI9 506 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 GJD3Q8N144 294 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 MRPL9Q9BYD2 267 aaKnown RBP24.53■■□□□ 1.52
HLA-E-203ENST00000493699 EPHX3Q9H6B9 360 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 SPG21Q9NZD8 308 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 FAM50BQ9Y247 325 aa24.53■■□□□ 1.52
HLA-E-203ENST00000493699 MBTPS2O43462 519 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 OFD1O75665 1012 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 U2AF2P26368 475 aaKnown RBP eCLIP24.52■■□□□ 1.52
HLA-E-203ENST00000493699 PPM1AP35813 382 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 TECP42680 631 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 PTENP60484 403 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 SMAD2Q15796 467 aaKnown RBP24.52■■□□□ 1.52
HLA-E-203ENST00000493699 CLUL1Q15846 466 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 LONRF3Q496Y0 759 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 UBXN11Q5T124 520 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 MRPL10Q7Z7H8 261 aaKnown RBP24.52■■□□□ 1.52
HLA-E-203ENST00000493699 IFNLR1Q8IU57 520 aaPredicted RBP24.52■■□□□ 1.52
HLA-E-203ENST00000493699 SLC39A11Q8N1S5 342 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 C4orf32Q8N8J7 132 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 TLE6Q9H808 572 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 TUFT1Q9NNX1 390 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 PRKAG3Q9UGI9 489 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 PUF60Q9UHX1 559 aaKnown RBP24.52■■□□□ 1.52
HLA-E-203ENST00000493699 PCDHB2Q9Y5E7 798 aa24.52■■□□□ 1.52
HLA-E-203ENST00000493699 PER2O15055 1255 aa24.51■■□□□ 1.51
HLA-E-203ENST00000493699 MED24O75448 989 aa24.51■■□□□ 1.51
HLA-E-203ENST00000493699 EYA4O95677 639 aa24.51■■□□□ 1.51
HLA-E-203ENST00000493699 TRAPPC10P48553 1259 aa24.51■■□□□ 1.51
HLA-E-203ENST00000493699 KRT17Q04695 432 aa24.51■■□□□ 1.51
HLA-E-203ENST00000493699 PCBP1Q15365 356 aaKnown RBP eCLIP24.51■■□□□ 1.51
HLA-E-203ENST00000493699 AGMOQ6ZNB7 445 aa24.51■■□□□ 1.51
HLA-E-203ENST00000493699 ASAP3Q8TDY4 903 aa24.51■■□□□ 1.51
HLA-E-203ENST00000493699 POLR3CQ9BUI4 534 aaPredicted RBP24.51■■□□□ 1.51
HLA-E-203ENST00000493699 CD207Q9UJ71 328 aa24.51■■□□□ 1.51
HLA-E-203ENST00000493699 OR52Z1P0C646 297 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 NDUFV1P49821 464 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 BCAR1P56945 870 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 SMAD4Q13485 552 aaKnown RBP24.5■■□□□ 1.51
HLA-E-203ENST00000493699 KCNC3Q14003 757 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 DUSP6Q16828 381 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 NOMO2Q5JPE7 1267 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 TTC38Q5R3I4 469 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 GLB1LQ6UWU2 654 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 PGBD4Q96DM1 585 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 CDCA3Q99618 268 aaPredicted RBP24.5■■□□□ 1.51
HLA-E-203ENST00000493699 TCF25Q9BQ70 676 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 NGRNQ9NPE2 291 aaKnown RBP24.5■■□□□ 1.51
HLA-E-203ENST00000493699 TBC1D13Q9NVG8 400 aa24.5■■□□□ 1.51
HLA-E-203ENST00000493699 C19orf67A6NJJ6 358 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 GLRA2P23416 452 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 RPA1P27694 616 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 ALDH7A1P49419 539 aaKnown RBP24.49■■□□□ 1.51
HLA-E-203ENST00000493699 ZP2Q05996 745 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 COASYQ13057 564 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 CAPSQ13938 189 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 VN1R2Q8NFZ6 395 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 C1QTNF1Q9BXJ1 281 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 NFKBIZQ9BYH8 718 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 NRDE2Q9H7Z3 1164 aa24.49■■□□□ 1.51
HLA-E-203ENST00000493699 DBR1Q9UK59 544 aaKnown RBP24.49■■□□□ 1.51
HLA-E-203ENST00000493699 HIDE1A8MVS5 230 aa24.48■■□□□ 1.51
HLA-E-203ENST00000493699 NT5C1B-RDH14C9J2C7 533 aa24.48■■□□□ 1.51
HLA-E-203ENST00000493699 PI4K2BG5E9Z4 385 aa24.48■■□□□ 1.51
HLA-E-203ENST00000493699 TSPAN1O60635 241 aa24.48■■□□□ 1.51
HLA-E-203ENST00000493699 TOB1P50616 345 aaPredicted RBP24.48■■□□□ 1.51
HLA-E-203ENST00000493699 RBM10P98175 930 aaKnown RBP24.48■■□□□ 1.51
HLA-E-203ENST00000493699 TFDP1Q14186 410 aa24.48■■□□□ 1.51
HLA-E-203ENST00000493699 AMHR2Q16671 573 aa24.48■■□□□ 1.51
HLA-E-203ENST00000493699 PLPP4Q5VZY2 271 aa24.48■■□□□ 1.51
HLA-E-203ENST00000493699 ADHFE1Q8IWW8 467 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms