RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PLA2G4FQ68DD2 849 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 GLB1LQ6UWU2 654 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 KREMEN2Q8NCW0 462 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 AUTS2Q8WXX7 1259 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 ZNF274Q96GC6 653 aaPredicted RBP19.5■□□□□ 0.71
COL9A1-210ENST00000493682 NLRP4Q96MN2 994 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 ZBP1Q9H171 429 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 NRDE2Q9H7Z3 1164 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 FAM105AQ9NUU6 356 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 TBC1D13Q9NVG8 400 aa19.5■□□□□ 0.71
COL9A1-210ENST00000493682 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-210ENST00000493682 C2CD4DB7Z1M9 353 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 EML1O00423 815 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 SLC37A4O43826 429 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 ZNF623O75123 536 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 OFD1O75665 1012 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 GALTP07902 379 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 WEE2P0C1S8 567 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 AVPR2P30518 371 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 POLGP54098 1239 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-210ENST00000493682 INF2Q27J81 1249 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 GALNT17Q6IS24 598 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 CATSPER4Q7RTX7 472 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 DDX53Q86TM3 631 aaKnown RBP19.49■□□□□ 0.71
COL9A1-210ENST00000493682 FAM177A1Q8N128 213 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-210ENST00000493682 C12orf76Q8N812 135 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-210ENST00000493682 BCL7CQ8WUZ0 217 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-210ENST00000493682 IGSF21Q96ID5 467 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 JPH2Q9BR39 696 aaPredicted RBP19.49■□□□□ 0.71
COL9A1-210ENST00000493682 INPP5FQ9Y2H2 1132 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 IRAK3Q9Y616 596 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 CYP46A1Q9Y6A2 500 aa19.49■□□□□ 0.71
COL9A1-210ENST00000493682 CARNS1A5YM72 827 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 PDGFBP01127 241 aaPredicted RBP19.48■□□□□ 0.71
COL9A1-210ENST00000493682 CTSAP10619 480 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 MTHFRP42898 656 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 RAB27AP51159 221 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 RNASELQ05823 741 aaKnown RBP19.48■□□□□ 0.71
COL9A1-210ENST00000493682 RARS2Q5T160 578 aaKnown RBP19.48■□□□□ 0.71
COL9A1-210ENST00000493682 KANK3Q6NY19 840 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 KRT25Q7Z3Z0 450 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 TMEM87AQ8NBN3 555 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 SLC22A17Q8WUG5 538 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 RIPOR3Q96MK2 946 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 IFT122Q9HBG6 1241 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 CYP26B1Q9NR63 512 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 DZANK1Q9NVP4 752 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 VAV3Q9UKW4 847 aa19.48■□□□□ 0.71
COL9A1-210ENST00000493682 ZDBF2Q9HCK1 2354 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 EPCAMP16422 314 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 QARSP47897 775 aaKnown RBP19.47■□□□□ 0.71
COL9A1-210ENST00000493682 NPEPPSP55786 919 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 STK3Q13188 491 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 PPP2R5CQ13362 524 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 MTMR3Q13615 1198 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 GIT2Q14161 759 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 LETM2Q2VYF4 491 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 CPLX2Q6PUV4 134 aaKnown RBP19.47■□□□□ 0.71
COL9A1-210ENST00000493682 UBALD2Q8IYN6 164 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 ZNF579Q8NAF0 562 aaKnown RBP19.47■□□□□ 0.71
COL9A1-210ENST00000493682 AGPAT5Q9NUQ2 364 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 DNAJB4Q9UDY4 337 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 KCNJ14Q9UNX9 436 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 SORCS3Q9UPU3 1222 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 PCDHB2Q9Y5E7 798 aa19.47■□□□□ 0.71
COL9A1-210ENST00000493682 EPB41L2O43491 1005 aaKnown RBP19.46■□□□□ 0.71
COL9A1-210ENST00000493682 B4GALT3O60512 393 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 BRD1O95696 1058 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 SLC11A1P49279 550 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 KIAA1841Q6NSI8 718 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 ZNF280BQ86YH2 543 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 SLC7A3Q8WY07 619 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 PGBD4Q96DM1 585 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 FAM20AQ96MK3 541 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 VN1R3Q9BXE9 311 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 TM6SF1Q9BZW5 370 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 GBP3Q9H0R5 595 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 KCNMB3Q9NPA1 279 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 WRAP73Q9P2S5 460 aaPredicted RBP19.46■□□□□ 0.71
COL9A1-210ENST00000493682 COL4A3BPQ9Y5P4 624 aa19.46■□□□□ 0.71
COL9A1-210ENST00000493682 ATAT1Q5SQI0 421 aa19.45■□□□□ 0.7
COL9A1-210ENST00000493682 AGMOQ6ZNB7 445 aa19.45■□□□□ 0.7
COL9A1-210ENST00000493682 PRPF31Q8WWY3 499 aaKnown RBP19.45■□□□□ 0.7
COL9A1-210ENST00000493682 TMEM143Q96AN5 459 aa19.45■□□□□ 0.7
COL9A1-210ENST00000493682 CEP170P1Q96L14 293 aa19.45■□□□□ 0.7
COL9A1-210ENST00000493682 PHF20Q9BVI0 1012 aa19.45■□□□□ 0.7
COL9A1-210ENST00000493682 SLKQ9H2G2 1235 aaPredicted RBP19.45■□□□□ 0.7
COL9A1-210ENST00000493682 SMOC2Q9H3U7 446 aa19.45■□□□□ 0.7
COL9A1-210ENST00000493682 DHX33Q9H6R0 707 aaKnown RBP19.45■□□□□ 0.7
COL9A1-210ENST00000493682 FAM86C1Q9NVL1 165 aa19.45■□□□□ 0.7
COL9A1-210ENST00000493682 CCDC194A0A1B0GVG4 234 aa19.44■□□□□ 0.7
COL9A1-210ENST00000493682 DKC1O60832 514 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL9A1-210ENST00000493682 P4HBP07237 508 aaKnown RBP19.44■□□□□ 0.7
COL9A1-210ENST00000493682 SRGAP2CP0DJJ0 459 aa19.44■□□□□ 0.7
COL9A1-210ENST00000493682 AFF1P51825 1210 aaKnown RBP19.44■□□□□ 0.7
COL9A1-210ENST00000493682 PTPN14Q15678 1187 aa19.44■□□□□ 0.7
COL9A1-210ENST00000493682 PPP4R3AQ6IN85 833 aa19.44■□□□□ 0.7
COL9A1-210ENST00000493682 MRPL10Q7Z7H8 261 aaKnown RBP19.44■□□□□ 0.7
COL9A1-210ENST00000493682 NEK8Q86SG6 692 aa19.44■□□□□ 0.7
COL9A1-210ENST00000493682 ZDHHC14Q8IZN3 488 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms