RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 DNAJC12Q9UKB3 198 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 KCNH4Q9UQ05 1017 aa11.75□□□□□ -0.53
PHACTR4-204ENST00000493669 TARSL2A2RTX5 802 aaKnown RBP11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 SLC25A27O95847 323 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 TRIM49P0CI25 452 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 TRIM49CP0CI26 452 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 WDR93Q6P2C0 686 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 USP37Q86T82 979 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 CCDC60Q8IWA6 550 aaPredicted RBP11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 CAGE1Q8TC20 777 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 MPHOSPH6Q99547 160 aaKnown RBP11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 BTBD7Q9P203 1132 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 SALL4Q9UJQ4 1053 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 AJAP1Q9UKB5 411 aaPredicted RBP11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 MAFBQ9Y5Q3 323 aaPredicted RBP11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 A0A0A6YYK5 440 aaPredicted RBP11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 CCDC169A6NNP5 214 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 PPIL2Q13356 520 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 LMO3Q8TAP4 145 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 RUBCNQ92622 972 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 IFT74Q96LB3 600 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 MMS19Q96T76 1030 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 SEPT9Q9UHD8 586 aaPredicted RBP11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 PPME1Q9Y570 386 aa11.74□□□□□ -0.53
PHACTR4-204ENST00000493669 EMSYQ7Z589 1322 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 DENND3A2RUS2 1198 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 KLRC1P26715 233 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 DRAP1Q14919 205 aaPredicted RBP11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 EPC2Q52LR7 807 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 ALKBH5Q6P6C2 394 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 GADL1Q6ZQY3 521 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 TMC2Q8TDI7 906 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 OSBPL9Q96SU4 736 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 PCIF1Q9H4Z3 704 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 AGTPBP1Q9UPW5 1226 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 SYNGAP1Q96PV0 1343 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 IGKV6D-21A0A0A0MT36 114 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 EVI5O60447 810 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 PNMA6AP0CW24 399 aaPredicted RBP11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 TGFB3P10600 412 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 GARTP22102 1010 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 NAP1L1P55209 391 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 BRDTQ58F21 947 aaPredicted RBP11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 CREG2Q8IUH2 290 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 GPIHBP1Q8IV16 184 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 FBXL18Q96ME1 805 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 SH2D3AQ9BRG2 576 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 EPC1Q9H2F5 836 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 XPNPEP1Q9NQW7 623 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 ZNF302Q9NR11 478 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 KIAA0391O15091 583 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 SRGAP2O75044 1071 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 CNGA1P29973 690 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 GTF2H1P32780 548 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 NEDD9Q14511 834 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 KIF22Q14807 665 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 GLIPR1L2Q4G1C9 344 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 GJB7Q6PEY0 223 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 ANKRD13CQ8N6S4 541 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 NOA1Q8NC60 698 aaKnown RBP11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 CDCA5Q96FF9 252 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 TLR10Q9BXR5 811 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 ELP3Q9H9T3 547 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 ARHGAP28Q9P2N2 729 aa11.73□□□□□ -0.53
PHACTR4-204ENST00000493669 LOC102724159A0A0B4J2E5 919 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 CES2O00748 559 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 OATP04181 439 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 H2AFZP0C0S5 128 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 MXI1P50539 228 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 CNTN2Q02246 1040 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 PWP2Q15269 919 aaKnown RBP11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 SNRNP35Q16560 246 aaKnown RBP11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 C1orf220Q5T0J3 134 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 CCDC70Q6NSX1 233 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 DPY19L2Q6NUT2 758 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 KCNV1Q6PIU1 500 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 H2AFVQ71UI9 128 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 MMGT1Q8N4V1 131 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 MSL3Q8N5Y2 521 aaKnown RBP11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 RDH13Q8NBN7 331 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 SLC30A5Q8TAD4 765 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 BSNDQ8WZ55 320 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 ARID3AQ99856 593 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 SYT11Q9BT88 431 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 NIFKQ9BYG3 293 aaKnown RBP11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 GPR88Q9GZN0 384 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 TISP43B9A030 160 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 BUB1O43683 1085 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 RFC5P40937 340 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 SP2Q02086 613 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 PPP3CAQ08209 521 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 ENOX2Q16206 610 aaKnown RBP11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 C9orf131Q5VYM1 1079 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 FASTKD5Q7L8L6 764 aaKnown RBP11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 CAPZA3Q96KX2 299 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 ASCC2Q9H1I8 757 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms