RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 XIRP2A4UGR9 3374 aa15.18■□□□□ 0.02
PDCD11-206ENST00000493610 SPTBN5Q9NRC6 3674 aaKnown RBP15.18■□□□□ 0.02
PDCD11-206ENST00000493610 B4GALT3O60512 393 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 ZSCAN20P17040 1043 aaPredicted RBP15.17■□□□□ 0.02
PDCD11-206ENST00000493610 AFF1P51825 1210 aaKnown RBP15.17■□□□□ 0.02
PDCD11-206ENST00000493610 MAPK7Q13164 816 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 MXD4Q14582 209 aaPredicted RBP15.17■□□□□ 0.02
PDCD11-206ENST00000493610 COL19A1Q14993 1142 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
PDCD11-206ENST00000493610 CDCA2Q69YH5 1023 aaPredicted RBP15.17■□□□□ 0.02
PDCD11-206ENST00000493610 DTHD1Q6ZMT9 781 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 AGMOQ6ZNB7 445 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 CATSPER4Q7RTX7 472 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 BRAPQ7Z569 592 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
PDCD11-206ENST00000493610 SMG8Q8ND04 991 aaKnown RBP15.17■□□□□ 0.02
PDCD11-206ENST00000493610 ERMNQ8TAM6 284 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 P2RX5Q93086 422 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 INO80BQ9C086 356 aaPredicted RBP15.17■□□□□ 0.02
PDCD11-206ENST00000493610 TMEM117Q9H0C3 514 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 BHMT2Q9H2M3 363 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 ALG13Q9NP73 1137 aaKnown RBP15.17■□□□□ 0.02
PDCD11-206ENST00000493610 FAM105AQ9NUU6 356 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 CLIC4Q9Y696 253 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 MYH15Q9Y2K3 1946 aa15.17■□□□□ 0.02
PDCD11-206ENST00000493610 VPS37CA5D8V6 355 aaPredicted RBP15.16■□□□□ 0.02
PDCD11-206ENST00000493610 VWA3AA6NCI4 1184 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 B4GALT5O43286 388 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 GTPBP6O43824 516 aaPredicted RBP15.16■□□□□ 0.02
PDCD11-206ENST00000493610 EOMESO95936 686 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 TFF2Q03403 129 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 SF3A1Q15459 793 aaKnown RBP15.16■□□□□ 0.02
PDCD11-206ENST00000493610 TMEM119Q4V9L6 283 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 HAUS3Q68CZ6 603 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 KLHL23Q8NBE8 558 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 HELQQ8TDG4 1101 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 CPB2Q96IY4 423 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 RUSC1Q9BVN2 902 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 PLVAPQ9BX97 442 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 EIF2AQ9BY44 585 aaKnown RBP15.16■□□□□ 0.02
PDCD11-206ENST00000493610 CCDC113Q9H0I3 377 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 BRWD1Q9NSI6 2320 aa15.16■□□□□ 0.02
PDCD11-206ENST00000493610 EYA4O95677 639 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 ARF4P18085 180 aaPredicted RBP15.15■□□□□ 0.02
PDCD11-206ENST00000493610 IRS1P35568 1242 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 LONRF3Q496Y0 759 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 C1orf186Q6ZWK4 172 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 COLGALT1Q8NBJ5 622 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 MCPH1Q8NEM0 835 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 FZD8Q9H461 694 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 DACT1Q9NYF0 836 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 USP20Q9Y2K6 914 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 RWDD3Q9Y3V2 267 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 PCDHB2Q9Y5E7 798 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 PCDHGC5Q9Y5F6 944 aa15.15■□□□□ 0.02
PDCD11-206ENST00000493610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.14■□□□□ 0.01
PDCD11-206ENST00000493610 ARHGEF35A5YM69 484 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 OFD1O75665 1012 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 PDCP20941 246 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 PBX3P40426 434 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 TCEAL5Q5H9L2 206 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 TWF2Q6IBS0 349 aaKnown RBP15.14■□□□□ 0.01
PDCD11-206ENST00000493610 RINT1Q6NUQ1 792 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 USP49Q70CQ1 688 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 CDR2LQ86X02 465 aaPredicted RBP15.14■□□□□ 0.01
PDCD11-206ENST00000493610 RNF169Q8NCN4 708 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 C11orf84Q9BUA3 381 aaPredicted RBP15.14■□□□□ 0.01
PDCD11-206ENST00000493610 KIFC3Q9BVG8 833 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 COL25A1Q9BXS0 654 aaPredicted RBP15.14■□□□□ 0.01
PDCD11-206ENST00000493610 THEGQ9P2T0 379 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 VCANP13611 3396 aa15.14■□□□□ 0.01
PDCD11-206ENST00000493610 INO80B-WBP1J3KQ70 363 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 SLC12A3P55017 1021 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 TFDP1Q14186 410 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 FAM187BQ17R55 369 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 NAALADL2Q58DX5 795 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 ARSHQ5FYA8 562 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 KRT79Q5XKE5 535 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 TAS1R3Q7RTX0 852 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 ADGRD2Q7Z7M1 963 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 TMEM173Q86WV6 379 aaPredicted RBP15.13■□□□□ 0.01
PDCD11-206ENST00000493610 USP28Q96RU2 1077 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 PLIN2Q99541 437 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 RAB34Q9BZG1 259 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 LMAN2LQ9H0V9 348 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 BLOC1S4Q9NUP1 217 aa15.13■□□□□ 0.01
PDCD11-206ENST00000493610 FBXO2Q9UK22 296 aaPredicted RBP15.13■□□□□ 0.01
PDCD11-206ENST00000493610 A0A1B0GUA9 196 aa15.12■□□□□ 0.01
PDCD11-206ENST00000493610 LRRIQ4A6NIV6 560 aa15.12■□□□□ 0.01
PDCD11-206ENST00000493610 INPPL1O15357 1258 aa15.12■□□□□ 0.01
PDCD11-206ENST00000493610 HOXA2O43364 376 aa15.12■□□□□ 0.01
PDCD11-206ENST00000493610 STX6O43752 255 aa15.12■□□□□ 0.01
PDCD11-206ENST00000493610 NCLP19338 710 aaKnown RBP15.12■□□□□ 0.01
PDCD11-206ENST00000493610 GTF2F1P35269 517 aaKnown RBP eCLIP15.12■□□□□ 0.01
PDCD11-206ENST00000493610 LTBRP36941 435 aa15.12■□□□□ 0.01
PDCD11-206ENST00000493610 NAMPTP43490 491 aa15.12■□□□□ 0.01
PDCD11-206ENST00000493610 RAB27AP51159 221 aa15.12■□□□□ 0.01
PDCD11-206ENST00000493610 KCNQ1P51787 676 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms