RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PRAMEF9Q5VWM5 478 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 KRT40Q6A162 431 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 Q6ZRM9 215 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 BMP8AQ7Z5Y6 402 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 CLEC14AQ86T13 490 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 ULK2Q8IYT8 1036 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 FAM9AQ8IZU1 332 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-218ENST00000493430 RPGRQ92834 1020 aaKnown RBP4.76□□□□□ -1.65
PTCD3-218ENST00000493430 C16orf92Q96LL3 132 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 CLUHP3Q96NS8 147 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 IL23AQ9NPF7 189 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 RCAN3Q9UKA8 241 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 SYNPO2Q9UMS6 1093 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 CFAP43Q8NDM7 1665 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 MAPKBP1O60336 1514 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 UGGT2Q9NYU1 1516 aa4.76□□□□□ -1.65
PTCD3-218ENST00000493430 TRAF5O00463 557 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 MAFGO15525 162 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 OPA1O60313 960 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 TOX4O94842 621 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 JUNP05412 331 aaKnown RBP4.75□□□□□ -1.65
PTCD3-218ENST00000493430 VSIG10L2P0DP72 767 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 ADAM8P78325 824 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 SMAD3P84022 425 aaKnown RBP4.75□□□□□ -1.65
PTCD3-218ENST00000493430 EPHA7Q15375 998 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 FKBP15Q5T1M5 1219 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 ZNF627Q7L945 461 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 KIAA1958Q8N8K9 716 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 GPR87Q9BY21 358 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 POLR3BQ9NW08 1133 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-218ENST00000493430 CARMIL1Q5VZK9 1371 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 KIF14Q15058 1648 aa4.75□□□□□ -1.65
PTCD3-218ENST00000493430 XDHP47989 1333 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 TTC37Q6PGP7 1564 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 RAMP2O60895 175 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 MFAP3LO75121 409 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 PTX3P26022 381 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-218ENST00000493430 FLT3P36888 993 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 SLC25A3Q00325 362 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 ADCY1Q08828 1119 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 SF3A1Q15459 793 aaKnown RBP4.74□□□□□ -1.65
PTCD3-218ENST00000493430 MFSD5Q6N075 450 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 TIGD7Q6NT04 549 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-218ENST00000493430 UBE2R2Q712K3 238 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-218ENST00000493430 DNAI1Q9UI46 699 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 TNPO3Q9Y5L0 923 aaKnown RBP4.74□□□□□ -1.65
PTCD3-218ENST00000493430 MYO5CQ9NQX4 1742 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 PCF11O94913 1555 aaKnown RBP4.74□□□□□ -1.65
PTCD3-218ENST00000493430 FRMPD1Q5SYB0 1578 aa4.74□□□□□ -1.65
PTCD3-218ENST00000493430 CDK13Q14004 1512 aaKnown RBP4.73□□□□□ -1.65
PTCD3-218ENST00000493430 RICTORQ6R327 1708 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 TMEM191CA6NGB0 347 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 GOLGA6L6A8MZA4 724 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 PTGS2P35354 604 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 ADCY2Q08462 1091 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 TOB2Q14106 344 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-218ENST00000493430 MYBPC3Q14896 1274 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 PIK3R6Q5UE93 754 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 ELOA2Q8IYF1 753 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-218ENST00000493430 ARL8AQ96BM9 186 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 ZG16BQ96DA0 208 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 TTPALQ9BTX7 342 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 HAPLN2Q9GZV7 340 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 C14orf93Q9H972 538 aaKnown RBP4.73□□□□□ -1.65
PTCD3-218ENST00000493430 NCDNQ9UBB6 729 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 B4GALT6Q9UBX8 382 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 DMRT1Q9Y5R6 373 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 ABCC10Q5T3U5 1492 aa4.73□□□□□ -1.65
PTCD3-218ENST00000493430 CDC42BPAQ5VT25 1732 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 CDC42BPBQ9Y5S2 1711 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 PPFIA2O75334 1257 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 RPS6KA4O75676 772 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 DNAJC8O75937 253 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-218ENST00000493430 IPO13O94829 963 aaKnown RBP4.72□□□□□ -1.65
PTCD3-218ENST00000493430 APOL3O95236 402 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 HNRNPLP14866 589 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTCD3-218ENST00000493430 SLC9A1P19634 815 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 KIR2DL3P43628 341 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 RABGGTBP53611 331 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 NPEPPSP55786 919 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 NANOS3P60323 173 aaKnown RBP4.72□□□□□ -1.65
PTCD3-218ENST00000493430 ZNF460Q14592 562 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 NFE2L2Q16236 605 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 MAN2A1Q16706 1144 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 RABL3Q5HYI8 236 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 PHYKPLQ8IUZ5 450 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 DNAJC10Q8IXB1 793 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 CMTM4Q8IZR5 234 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 ATXN2LQ8WWM7 1075 aaKnown RBP4.72□□□□□ -1.65
PTCD3-218ENST00000493430 HAS1Q92839 578 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 ZNF512Q96ME7 567 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-218ENST00000493430 MNTQ99583 582 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 ELF4Q99607 663 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-218ENST00000493430 OSBPL6Q9BZF3 934 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 OSBPL2Q9H1P3 480 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 NRDE2Q9H7Z3 1164 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 GPRC5BQ9NZH0 403 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 CDK11AQ9UQ88 783 aaPredicted RBP4.72□□□□□ -1.65
PTCD3-218ENST00000493430 PRXQ9BXM0 1461 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 RIMS1Q86UR5 1692 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms