RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 RBL2Q08999 1139 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 FAAP100Q0VG06 881 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 TRIM29Q14134 588 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 SAFBQ15424 915 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS52-219ENST00000493379 CXCL17Q6UXB2 119 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 PIK3AP1Q6ZUJ8 805 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 ZNF365Q70YC5 407 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 FAM126BQ8IXS8 530 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 SMAP1Q8IYB5 467 aaPredicted RBP7.6□□□□□ -1.19
VPS52-219ENST00000493379 C4orf32Q8N8J7 132 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 FAM184AQ8NB25 1140 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 RDM1Q8NG50 284 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 HELQQ8TDG4 1101 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 CTAGE1Q96RT6 745 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 PCYT2Q99447 389 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 KATNAL1Q9BW62 490 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 JPH1Q9HDC5 661 aaPredicted RBP7.6□□□□□ -1.19
VPS52-219ENST00000493379 STARD7Q9NQZ5 370 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 RAB6BQ9NRW1 208 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 SLC9A2Q9UBY0 812 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 SMC3Q9UQE7 1217 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 TELO2Q9Y4R8 837 aa7.6□□□□□ -1.19
VPS52-219ENST00000493379 MORC2Q9Y6X9 1032 aaPredicted RBP7.6□□□□□ -1.19
VPS52-219ENST00000493379 COL4A4P53420 1690 aaPredicted RBP7.6□□□□□ -1.19
VPS52-219ENST00000493379 MROH7Q68CQ1 1323 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 SCN10AQ9Y5Y9 1956 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 A0A1W2PRU2 124 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 KIF28PB7ZC32 967 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 SLC37A4O43826 429 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 PQBP1O60828 265 aaKnown RBP7.59□□□□□ -1.19
VPS52-219ENST00000493379 TDP2O95551 362 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 CCNE2O96020 404 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 IL2RAP01589 272 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 LGALS2P05162 132 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 KCNA5P22460 613 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 SFNP31947 248 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 ZNF76P36508 570 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 ACTR2P61160 394 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 KRT76Q01546 638 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 SPIRE1Q08AE8 756 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 PPP2R5CQ13362 524 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 NNTQ13423 1086 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 PRR16Q569H4 304 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 LARP1BQ659C4 914 aaKnown RBP7.59□□□□□ -1.19
VPS52-219ENST00000493379 SPRED2Q7Z698 418 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 RPAINQ86UA6 219 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 LURAP1LQ8IV03 231 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 KDF1Q8NAX2 398 aaPredicted RBP7.59□□□□□ -1.19
VPS52-219ENST00000493379 PRRX2Q99811 253 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 ZNF577Q9BSK1 485 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 SMARCAD1Q9H4L7 1026 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 UBE2ZQ9H832 354 aaPredicted RBP7.59□□□□□ -1.19
VPS52-219ENST00000493379 TMEM39AQ9NV64 488 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 TBX21Q9UL17 535 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 PCDHA10Q9Y5I2 948 aa7.59□□□□□ -1.19
VPS52-219ENST00000493379 FRYLO94915 3013 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 MBLAC1A4D2B0 266 aaPredicted RBP7.58□□□□□ -1.2
VPS52-219ENST00000493379 ANKRD33BA6NCL7 494 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 TMEM221A6NGB7 291 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 M0R296 226 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 ARHGEF15O94989 841 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 STBD1O95210 358 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 ADH1AP07327 375 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 SUPT20HL2P0C7V6 817 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 NPR3P17342 541 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 ATP4AP20648 1035 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 SYT1P21579 422 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 IRS1P35568 1242 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 TCF7P36402 384 aaPredicted RBP7.58□□□□□ -1.2
VPS52-219ENST00000493379 LETM2Q2VYF4 491 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 LEXMQ3ZCV2 418 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 RILPL1Q5EBL4 403 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 TBCELQ5QJ74 424 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 FRMD5Q7Z6J6 570 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 ZNF598Q86UK7 904 aaKnown RBP7.58□□□□□ -1.2
VPS52-219ENST00000493379 SLC9A9Q8IVB4 645 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 SUGP1Q8IWZ8 645 aaKnown RBP7.58□□□□□ -1.2
VPS52-219ENST00000493379 SLFN12Q8IYM2 578 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 HSD17B14Q9BPX1 270 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 SDF4Q9BRK5 362 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 RNPEPQ9H4A4 650 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 PKD2L1Q9P0L9 805 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 DDX25Q9UHL0 483 aaKnown RBP7.58□□□□□ -1.2
VPS52-219ENST00000493379 GTF2IRD1Q9UHL9 959 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 VAV3Q9UKW4 847 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 HRH3Q9Y5N1 445 aa7.58□□□□□ -1.2
VPS52-219ENST00000493379 NRCAMQ92823 1304 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 MYH7BA7E2Y1 1941 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 DCDC2CA8MYV0 355 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 LAD1O00515 517 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 NOP56O00567 594 aaKnown RBP7.57□□□□□ -1.2
VPS52-219ENST00000493379 CCNT1O60563 726 aaKnown RBP7.57□□□□□ -1.2
VPS52-219ENST00000493379 LYPLA2O95372 231 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 MYL3P08590 195 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 CSF2RAP15509 400 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 PRPHP41219 470 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 STAT5BP51692 787 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 JAK3P52333 1124 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 PSMC6P62333 389 aa7.57□□□□□ -1.2
VPS52-219ENST00000493379 ZP2Q05996 745 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms