RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 HAS1Q92839 578 aa23.2■■□□□ 1.3
PHTF1-212ENST00000493212 TMEM169Q96HH4 297 aa23.2■■□□□ 1.3
PHTF1-212ENST00000493212 NLRP4Q96MN2 994 aa23.2■■□□□ 1.3
PHTF1-212ENST00000493212 ADAM7Q9H2U9 754 aa23.2■■□□□ 1.3
PHTF1-212ENST00000493212 DHX33Q9H6R0 707 aaKnown RBP23.2■■□□□ 1.3
PHTF1-212ENST00000493212 NRDE2Q9H7Z3 1164 aa23.2■■□□□ 1.3
PHTF1-212ENST00000493212 AGPAT5Q9NUQ2 364 aa23.2■■□□□ 1.3
PHTF1-212ENST00000493212 PPME1Q9Y570 386 aa23.2■■□□□ 1.3
PHTF1-212ENST00000493212 KMT2EQ8IZD2 1858 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 CARNS1A5YM72 827 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 ZC3H11AO75152 810 aaKnown RBP eCLIP23.19■■□□□ 1.3
PHTF1-212ENST00000493212 OFD1O75665 1012 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 GALTP07902 379 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 RAB27AP51159 221 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 ITIH3Q06033 890 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 TPRNQ4KMQ1 711 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 NOMO2Q5JPE7 1267 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 IER5LQ5T953 404 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 CATSPER4Q7RTX7 472 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 NEK8Q86SG6 692 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 DDX53Q86TM3 631 aaKnown RBP23.19■■□□□ 1.3
PHTF1-212ENST00000493212 VPS52Q8N1B4 723 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 FBXL6Q8N531 539 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 BCL7CQ8WUZ0 217 aaPredicted RBP23.19■■□□□ 1.3
PHTF1-212ENST00000493212 IGSF21Q96ID5 467 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 GJB4Q9NTQ9 266 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 COL4A3BPQ9Y5P4 624 aa23.19■■□□□ 1.3
PHTF1-212ENST00000493212 CCDC194A0A1B0GVG4 234 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 TBX3O15119 743 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 B4GALT3O60512 393 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 CXCL14O95715 111 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 P4HBP07237 508 aaKnown RBP23.18■■□□□ 1.3
PHTF1-212ENST00000493212 CTSAP10619 480 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 POLGP54098 1239 aaPredicted RBP23.18■■□□□ 1.3
PHTF1-212ENST00000493212 LONRF3Q496Y0 759 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 GLB1LQ6UWU2 654 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 OXER1Q8TDS5 423 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 POMKQ9H5K3 350 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 MINDY3Q9H8M7 445 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 ZDBF2Q9HCK1 2354 aa23.18■■□□□ 1.3
PHTF1-212ENST00000493212 PFKFB2O60825 505 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 DKC1O60832 514 aaKnown RBP eCLIP23.17■■□□□ 1.3
PHTF1-212ENST00000493212 CDKL5O76039 1030 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 SPIRE1Q08AE8 756 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 AGMOQ6ZNB7 445 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 MRPL10Q7Z7H8 261 aaKnown RBP23.17■■□□□ 1.3
PHTF1-212ENST00000493212 C4orf19Q8IY42 314 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 SLC7A3Q8WY07 619 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 CEP170P1Q96L14 293 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 NECTIN4Q96NY8 510 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 VN1R3Q9BXE9 311 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 DNAJB4Q9UDY4 337 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 TPCN1Q9ULQ1 816 aa23.17■■□□□ 1.3
PHTF1-212ENST00000493212 CTDNEP1O95476 244 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 HOXA11P31270 313 aaPredicted RBP23.16■■□□□ 1.3
PHTF1-212ENST00000493212 RFC5P40937 340 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 EPHA7Q15375 998 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 EARS2Q5JPH6 523 aaKnown RBP23.16■■□□□ 1.3
PHTF1-212ENST00000493212 CES5AQ6NT32 575 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 SRGAP1Q7Z6B7 1085 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 EXOC8Q8IYI6 725 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 SLC22A17Q8WUG5 538 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 PRPF31Q8WWY3 499 aaKnown RBP23.16■■□□□ 1.3
PHTF1-212ENST00000493212 AUTS2Q8WXX7 1259 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 INPP5FQ9Y2H2 1132 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 NR2E1Q9Y466 385 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 PCDHB2Q9Y5E7 798 aa23.16■■□□□ 1.3
PHTF1-212ENST00000493212 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.15■■□□□ 1.3
PHTF1-212ENST00000493212 CCNT1O60563 726 aaKnown RBP23.15■■□□□ 1.3
PHTF1-212ENST00000493212 SP100P23497 879 aaPredicted RBP23.15■■□□□ 1.3
PHTF1-212ENST00000493212 SLC11A1P49279 550 aa23.15■■□□□ 1.3
PHTF1-212ENST00000493212 AFF1P51825 1210 aaKnown RBP23.15■■□□□ 1.3
PHTF1-212ENST00000493212 GIT2Q14161 759 aa23.15■■□□□ 1.3
PHTF1-212ENST00000493212 BMS1Q14692 1282 aaKnown RBP23.15■■□□□ 1.3
PHTF1-212ENST00000493212 UBXN11Q5T124 520 aa23.15■■□□□ 1.3
PHTF1-212ENST00000493212 PIK3AP1Q6ZUJ8 805 aa23.15■■□□□ 1.3
PHTF1-212ENST00000493212 ZNF280BQ86YH2 543 aa23.15■■□□□ 1.3
PHTF1-212ENST00000493212 SUGP1Q8IWZ8 645 aaKnown RBP23.15■■□□□ 1.3
PHTF1-212ENST00000493212 PSPC1Q8WXF1 523 aaKnown RBP23.15■■□□□ 1.3
PHTF1-212ENST00000493212 TMEM143Q96AN5 459 aa23.15■■□□□ 1.3
PHTF1-212ENST00000493212 PGBD4Q96DM1 585 aa23.15■■□□□ 1.3
PHTF1-212ENST00000493212 LXNQ9BS40 222 aa23.15■■□□□ 1.3
PHTF1-212ENST00000493212 SLKQ9H2G2 1235 aaPredicted RBP23.15■■□□□ 1.3
PHTF1-212ENST00000493212 C2CD4DB7Z1M9 353 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 DTNBO60941 627 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 XBP1P17861 261 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 YWHABP31946 246 aaKnown RBP23.14■■□□□ 1.29
PHTF1-212ENST00000493212 MTHFRP42898 656 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 LAMTOR4Q0VGL1 99 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 TCF15Q12870 199 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 POTEDQ86YR6 584 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 TNFRSF25Q93038 417 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 NAP1L4Q99733 375 aaKnown RBP23.14■■□□□ 1.29
PHTF1-212ENST00000493212 PRRX2Q99811 253 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 DZANK1Q9NVP4 752 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 RGL1Q9NZL6 768 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 ARID2Q68CP9 1835 aa23.14■■□□□ 1.29
PHTF1-212ENST00000493212 GAS2O43903 313 aaKnown RBP23.13■■□□□ 1.29
PHTF1-212ENST00000493212 DDHD2O94830 711 aa23.13■■□□□ 1.29
PHTF1-212ENST00000493212 EPCAMP16422 314 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms